Job Description Q9JMT8 Confidence 77.98% Date Thu Jan 5 12:38:13 GMT 2012 Rank 144 Aligned Residues 111 % Identity 9% Template c3lteH_ PDB info PDB header:transcription Chain: H: PDB Molecule:response regulator; PDBTitle: crystal structure of response regulator (signal receiver domain) from2 bermanella marisrubri Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	R	R	Y	Q	S	S	L	R	R	I	R	N	N	N	V	Y	L	S	L	N	D	F	G	M	G	Y	A	E	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	I	D	V	I	A	D
Query Conservation
Alig confidence																								.	.																							.	.	.	.	.
Template Conservation																								.	.																							.	.	.	.	.
Template Sequence		D	D	Q	A	M	A	A	A	I	E	R	V	L	K	R	D	H	W	Q	V	E	I	.	.	A	H	N	G	F	D	A	G	I	K	L	S	T	F	E	P	A	I	M	T	L	D	.	.	.	.	.	L	S	M	P	K	L	D	G	L	D	V	I	R	S	L	R	Q	N	K	V	A	N	Q	P	K	I	L	V	V
Template Known Secondary structure		S															T	T						.	.		S	S											T			S						.	.	.	.	.	S			S	S													T	T		S	S
Template Predicted Secondary structure																								.	.																							.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.						.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	G	I	A	L	S	S	P	L	P	A	D	A	F	V	R	K	L	L	A	S	L	K
Query Conservation
Alig confidence																					.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		S	G	L	D	K	A	K	L	Q	Q	A	V	T	E	G	A	D	D	Y	.	.	.	.	L	E	K	P	F	D	N	D	A	L	L	D	R	I	H	D	L	V	N
Template Known Secondary structure				S											T	T		S			.	.	.	.			S	S														T
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.					.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions