Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT8
Confidence31.56%DateThu Jan 5 12:38:13 GMT 2012
Rank308Aligned Residues106
% Identity8%Templatec3k2gA_
PDB info PDB header:resiniferatoxin binding proteinChain: A: PDB Molecule:resiniferatoxin-binding, phosphotriesterase- PDBTitle: crystal structure of a resiniferatoxin-binding protein from2 rhodobacter sphaeroides
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   160.........170.........180.........190.........200.........210.........220.........230.........
Predicted Secondary structure 


















Query SS confidence 















































































Query Sequence  DNKVSYLFGHINKLFSPIKNNLPHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSL
Query Conservation                             
 



   
    
   
   
         
 


 
             
Alig confidence 
























..





....

































.....



Template Conservation      
  
 
 




 

 


 
..
 


 ....       


 

 
 


  



 
 
    
.....    
Template Sequence  SSDFTAEEEKSLRGAARAQVRTGLP. . LXVHLP. . . . GWFRLAHRVLDLVEEEGADLRHTVLCHXNPSHXD. . . . . PVYQ
Template Known Secondary structure 
TT




..

....TTS

TT

GGG


GGGTT
.....
Template Predicted Secondary structure 








..

....















.....
Template SS confidence 















































































   179180.........190.........200... ...... 210.........220.........230.........240... ....
 
   240.........250.........260.........270......
Predicted Secondary structure 












Query SS confidence 




































Query Sequence  RRIRNNNVYLSLNDFGMGYAELSHLQNIPFSYVNLHK
Query Conservation    
   
  
 




 
  

  
  
  
 



 
Alig confidence 




































Template Conservation        
  
 

 

              
  
   
Template Sequence  ATLAQRGAFLEFDXIGXDFFYADQGVQCPSDDEVARA
Template Known Secondary structure  T


TT


TTTT


Template Predicted Secondary structure 




















Template SS confidence 




































   248.250.........260.........270.........280....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions