Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT8
Confidence53.37%DateThu Jan 5 12:38:13 GMT 2012
Rank241Aligned Residues112
% Identity13%Templatec3h1gA_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:chemotaxis protein chey homolog; PDBTitle: crystal structure of chey mutant t84a of helicobacter pylori
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   230.........240.........250.........260.... .....270.........280.........290.........300.......
Predicted Secondary structure 









.













.
Query SS confidence 


































.










































.
Query Sequence  YIIRRYQSSLRRIRNNNVYLSLNDFGMGYAELSHL. QNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVI.
Query Conservation           
  
   
  
 




 
  

  
.  
  
 



   
            
  
  

  
 
 

.
Alig confidence 


















.














.













.....























.
Template Conservation 
       
   
   
  . 
       


         
 

 
  
.....    
      

        


 
Template Sequence  DSSTMRRIIKNTLSRLGYE. DVLEAEHGVEAWEKLDANADTKVLITDWNM. . . . . PEMNGLDLVKKVRSDSRFKEIPIIM
Template Known Secondary structure  S
TT

.
SS
TT


S

.....SSS
TSTT
TT

Template Predicted Secondary structure 




.











.....










Template SS confidence 















































































   8.10.........20...... ...30.........40.........50...... ...60.........70.........80.
 
   308.310.........320.........330.........340.........350.
Predicted Secondary structure 

















Query SS confidence 











































Query Sequence  ADGIETKKQAGYMIERGVKYLKGIALSSPLPADAFVRKLLASLK
Query Conservation 
 


  

   
   
    

     
         
     
Alig confidence 




















....


















Template Conservation 

              
    ....
 

     
   
   
 
Template Sequence  ITAEGGKAEVITALKAGVNNY. . . . IVKPFTPQVLKEKLEVVLG
Template Known Secondary structure  S

ST

....S



Template Predicted Secondary structure 







....




Template SS confidence 











































   82.......90.........100.. .......110.........120.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions