Job Description Q9JMT8 Confidence 33.85% Date Thu Jan 5 12:38:13 GMT 2012 Rank 298 Aligned Residues 100 % Identity 13% Template c3eodA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:protein hnr; PDBTitle: crystal structure of n-terminal domain of e. coli rssb Resolution 1.75 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		Y	I	I	R	R	Y	Q	S	S	L	R	R	I	R	N	N	N	V	Y	L	S	L	N	D	F	G	M	G	Y	A	E	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	I	D	V	I	A	.
Query Conservation																																																																																	.
Alig confidence																					.	.																											.	.	.	.	.	.	.	.	.	.												.	.										.
Template Conservation																					.	.																											.	.	.	.	.	.	.	.	.	.												.	.
Template Sequence		D	E	Q	V	F	R	S	L	L	D	S	W	F	S	S	L	G	A	T	.	.	T	V	L	A	A	D	G	V	D	A	L	E	L	L	G	G	F	T	P	D	L	M	I	C	D	I	.	.	.	.	.	.	.	.	.	.	A	G	L	K	L	L	E	H	I	R	N	.	.	R	G	D	Q	T	P	V	L	V	I
Template Known Secondary structure		S															T	T			.	.					S										T	T				S							.	.	.	.	.	.	.	.	.	.												.	.	T	T
Template Predicted Secondary structure																					.	.																											.	.	.	.	.	.	.	.	.	.												.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.			.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.											60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.		340	.	.	.	.	.	.	.
Predicted Secondary structure																																	.
Query SS confidence																																	.
Query Sequence		D	G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	G	I	A	L	S	S	P	L	P	A	.	D	A	F	V	R	K	L	L
Query Conservation																																	.
Alig confidence																					.	.	.	.									.
Template Conservation																					.	.	.	.
Template Sequence		S	A	T	E	N	M	A	D	I	A	K	A	L	R	L	G	V	E	D	.	.	.	.	V	L	L	K	P	V	N	R	L	R	E	M	V	F	A	C	L
Template Known Secondary structure																			S		.	.	.	.				S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.					.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions