Job Description Q9JMT8 Confidence 92.05% Date Thu Jan 5 12:38:13 GMT 2012 Rank 60 Aligned Residues 114 % Identity 16% Template c3cnbC_ PDB info PDB header:dna binding protein Chain: C: PDB Molecule:dna-binding response regulator, merr family; PDBTitle: crystal structure of signal receiver domain of dna binding response2 regulator protein (merr) from colwellia psychrerythraea 34h Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																	.
Query SS confidence																																																																																	.
Query Sequence		Y	I	I	R	R	Y	Q	S	S	L	R	R	I	R	N	N	N	V	Y	L	S	L	N	D	F	G	M	G	Y	A	E	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	I	D	V	I	A	.
Query Conservation																																																																																	.
Alig confidence																																																				.	.	.	.	.																									.
Template Conservation																																																				.	.	.	.	.
Template Sequence		D	D	K	E	F	A	D	M	L	T	Q	F	L	E	N	L	F	P	Y	A	K	I	K	I	A	Y	N	P	F	D	A	G	D	L	L	H	T	V	K	P	D	V	V	M	L	D	L	M	M	V	.	.	.	.	.	G	M	D	G	F	S	I	C	H	R	I	K	S	T	P	A	T	A	N	I	I	V	I	A	M
Template Known Secondary structure		S																	T	T	S							S											T			S						T	T		T	.	.	.	.	.	T	S											T	S	T	T	T	T	T	S
Template Predicted Secondary structure																																																				.	.	.	.	.
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.						.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
		309	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	G	I	A	L	S	S	P	L	P	A	D	A	F	V	R	K	L	L	A	S	L	K	Q
Query Conservation
Alig confidence																				.	.	.	.
Template Conservation																				.	.	.	.
Template Sequence		T	G	A	L	T	D	D	N	V	S	R	I	V	A	L	G	A	E	.	.	.	.	T	C	F	G	K	P	L	N	F	T	L	L	E	K	T	I	K	Q	L	V	E	Q
Template Known Secondary structure			S	S												T	T		S	.	.	.	.					S	S
Template Predicted Secondary structure																				.	.	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.					.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions