Job Description Q9JMT8 Confidence 87.89% Date Thu Jan 5 12:38:13 GMT 2012 Rank 89 Aligned Residues 109 % Identity 13% Template c3cfyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative luxo repressor protein; PDBTitle: crystal structure of signal receiver domain of putative luxo2 repressor protein from vibrio parahaemolyticus Resolution 2.50 Å

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		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	I	I	R	R	Y	Q	S	S	L	R	R	I	R	N	N	N	V	Y	L	S	L	N	D	F	G	M	G	Y	A	E	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	I	D	V	I	A	D
Query Conservation
Alig confidence																					.	.																													.	.	.	.	.															.	.
Template Conservation																					.	.																													.	.	.	.	.															.	.
Template Sequence		D	S	T	S	L	A	I	L	Y	K	Q	Y	V	K	D	E	P	Y	D	.	.	I	F	H	V	E	T	G	R	D	A	I	Q	F	I	E	R	S	K	P	Q	L	I	I	L	D	L	K	L	.	.	.	.	.	P	D	M	S	G	E	D	V	L	D	W	I	N	Q	.	.	N	D	I	P	T	S	V	I	I	A
Template Known Secondary structure		S		T	T									T	T	T	S	S	S		.	.					S	S														S						S	B		.	.	.	.	.	S	S	S	B											.	.	T	T
Template Predicted Secondary structure																					.	.																													.	.	.	.	.															.	.
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.			.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.						.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80
			310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	G	I	A	L	S	S	P	L	P	A	D	A	F	V	R	K	L	L	A	S	L	K
Query Conservation		.
Alig confidence		.																			.	.	.	.
Template Conservation																					.	.	.	.
Template Sequence		T	A	H	G	S	V	D	L	A	V	N	L	I	Q	K	G	A	E	D	.	.	.	.	F	L	E	K	P	I	N	A	D	R	L	K	T	S	V	A	L	H	L	K
Template Known Secondary structure			S	S												T	T		S		.	.	.	.				S	S
Template Predicted Secondary structure																					.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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