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Job Description | Q9JMT8 | Confidence | 88.76% | Date | Thu Jan 5 12:38:13 GMT 2012 |
Rank | 82 | Aligned Residues | 105 |
% Identity | 8% | Template | c2yxbA_ |
PDB info |
PDB header:isomerase | Chain: A: PDB Molecule:coenzyme b12-dependent mutase; |
PDBTitle: crystal structure of the methylmalonyl-coa mutase alpha-subunit from2 aeropyrum pernix
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Resolution | 1.80 Å |
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Predicted Secondary structure |   |
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Query Sequence |   |
R | R | I | R | N | N | N | V | Y | L | . |
S | L | N | D | F | G | M | G | Y | A | E | L | S | H | L | Q | N | I | P | F | S | Y | V | N | L | H | K | T | M | F | H | D | I | E | S | N | S | L | T | D | I | I | A | T | T | I | I | D | L | S | K | Q | L | H | I | D | V | I | A | D | G | I | E | T | K | K | Q | A | G |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
R | A | L | R | D | A | G | F | E | V | V | Y | T | G | L | R | Q | T | P | E | Q | V | A | X | A | A | V | Q | E | D | V | D | V | I | G | V | S | . |
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I | L | N | G | A | H | L | H | L | X | K | R | L | X | A | K | L | R | E | L | G | A | D | D | I | P | V | V | L | G | G | T | I | P | I | P | D | L | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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42 | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | |
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. | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . |
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319 | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . |
Predicted Secondary structure |   |
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Query SS confidence |   |
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Query Sequence |   |
Y | M | I | E | R | G | V | K | Y | L | K | G | I | A | L | S | S | P | L | P | A | D | A | F | V | R | K | L | L | A | S | L | K | Q |
Query Conservation |   |
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Alig confidence |   |
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Template Conservation |   |
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Template Sequence |   |
P | L | R | S | L | G | I | R | E | I | . |
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F | L | P | G | T | S | L | G | E | I | I | E | K | V | R | K | L | A | E | E |
Template Known Secondary structure |   |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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118 | . | 120 | . | . | . | . | . | . | . | |
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. | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . |
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No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
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