Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT8
Confidence90.85%DateThu Jan 5 12:38:13 GMT 2012
Rank68Aligned Residues127
% Identity14%Templatec2pz0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:glycerophosphoryl diester phosphodiesterase; PDBTitle: crystal structure of glycerophosphodiester phosphodiesterase (gdpd)2 from t. tengcongensis
Resolution1.91 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   182.......190.........200.........210.........220.........230.........240.........250.........260.
Predicted Secondary structure 






















Query SS confidence 















































































Query Sequence  PHGFFITININPEDILTCDIERECLHFIKVFGTERIRLVLQFSTKEELYIIRRYQSSLRRIRNNNVYLSLNDFGMGYAEL
Query Conservation       
 



   
    
   
   
         
 


 
             
  
   
  
 




 
  

Alig confidence 

































.

















........


















Template Conservation         



                
      .  
 
 
           ........  
                
Template Sequence  DKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFE. ERVIISSFNHYSLRDVKK. . . . . . . . MAPHLKIGLLYQCGLVEPW
Template Known Secondary structure  TS



SSS

TTTT
T.TTS
........
TTS
S

SST
Template Predicted Secondary structure 













.



........










Template SS confidence 















































































   111........120.........130.........140.... .....150.........160.. .......170.........180.
 
   262.......270.........280.........290.........300.........310.........320.........
Predicted Secondary structure 




















Query SS confidence 



































































Query Sequence  SHLQNIPFSYVNLHKTMFHDIESNSLTDIIATTIIDLSKQLHIDVIADGIETKKQAGYMIERGVKYLK
Query Conservation    
  
  
 



   
            
  
  

  
 
 


 


  

   
   
    
Alig confidence 



















............



































Template Conservation            
         ............  
      
  
  



       
   




 
Template Sequence  HMALRMEAYSLHPFYFNIIP. . . . . . . . . . . . ELVEGCKKNGVKLFPWTVDRKEDMERMIKAGVDGII
Template Known Secondary structure  TT
SBGGG

............TTT


B


ST
S
Template Predicted Secondary structure 




............










Template SS confidence 



































































   182.......190.........200. ........210.........220.........230.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions