Job Description Q9JMT8 Confidence 59.11% Date Thu Jan 5 12:38:13 GMT 2012 Rank 229 Aligned Residues 194 % Identity 18% Template c1tv5A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:dihydroorotate dehydrogenase homolog, mitochondrial; PDBTitle: plasmodium falciparum dihydroorotate dehydrogenase with a bound2 inhibitor Resolution 2.40 Å

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		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230						.	.
Predicted Secondary structure																																																																											.	.	.	.	.
Query SS confidence																																																																											.	.	.	.	.
Query Sequence		P	N	D	N	K	V	S	Y	L	F	G	H	I	N	K	L	F	S	P	I	K	N	N	L	P	H	G	F	F	I	T	I	N	I	N	P	E	D	I	L	T	C	D	I	E	R	E	C	L	H	F	I	K	V	F	G	T	E	R	I	R	L	V	L	Q	F	S	T	K	E	E	L	Y	.	.	.	.	.	I	I
Query Conservation																																																																											.	.	.	.	.
Alig confidence																																										.																																	.	.	.	.	.
Template Conservation																																										.
Template Sequence		N	N	M	G	C	D	K	V	T	E	N	L	I	L	F	R	K	R	Q	E	E	D	K	L	L	S	K	H	I	V	G	V	S	I	G	K	N	K	D	T	.	V	N	I	V	D	D	L	K	Y	C	I	N	K	I	G	R	Y	A	D	Y	I	A	I	N	V	S	S	P	N	T	P	G	L	R	D	N	Q	E	A
Template Known Secondary structure			B	S																				S	T	T	T	T											T	T		.	S														G	G	G		S									T	T	S	T	T	G	G	G	G	G	S
Template Predicted Secondary structure																																										.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.		.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.
		233	.	.	.	.	.	.	240	.	.	.	.																			.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260		.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.
Query Sequence		R	R	Y	Q	S	S	L	R	R	I	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	N	V	Y	L	S	L	N	D	F	G	M	G	Y	A	E	.	L	S	H	L	Q	N	I	P	F	S	Y	V	N	L	H	K	T	M	F	H	D	I	E	S	N	S	L	T	.	.	.	.	.
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.																													.	.	.	.	.
Template Conservation
Template Sequence		G	K	L	K	N	I	I	L	S	V	K	E	E	I	D	N	L	E	F	L	W	F	N	T	T	K	K	K	P	L	V	F	V	K	L	A	P	D	L	N	Q	E	Q	K	K	E	I	A	D	V	L	L	E	T	N	I	D	G	M	I	I	S	N	T	T	T	Q	I	N	D	I	K	S	F	E	N	K	K	G	G
Template Known Secondary structure																								S	S	S	S	S										S																	T	T		S								B	S						G	G	G	T	T			S
Template Predicted Secondary structure
Template SS confidence
		358	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.
									289	290	.	.	.	.	.	.	.	.	.	300	.	.	.			.	.	.	.	.	.		310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.				330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.
Predicted Secondary structure		.	.	.	.	.	.	.																.	.							.																					.	.	.
Query SS confidence		.	.	.	.	.	.	.																.	.							.																					.	.	.
Query Sequence		.	.	.	.	.	.	.	D	I	I	A	T	T	I	I	D	L	S	K	Q	L	H	.	.	I	D	V	I	A	D	.	G	I	E	T	K	K	Q	A	G	Y	M	I	E	R	G	V	K	Y	L	K	.	.	.	G	I	A	L	S	S	P	L	P	A	D	A	F	V	R	K	L	L	A	S	L	K	Q
Query Conservation		.	.	.	.	.	.	.																.	.							.																					.	.	.
Alig confidence		.	.	.	.	.	.	.																.	.							.																					.	.	.
Template Conservation
Template Sequence		V	S	G	A	K	L	K	D	I	S	T	K	F	I	C	E	M	Y	N	Y	T	N	K	Q	I	P	I	I	A	S	G	G	I	F	S	G	L	D	A	L	E	K	I	E	A	G	A	S	V	C	Q	L	Y	S	C	L	V	F	N	G	M	K	S	A	V	Q	I	K	R	E	L	N	H	L	L	Y	Q
Template Known Secondary structure																						T	T	T		S						S	S			S										T	T							S							G	G	G
Template Predicted Secondary structure
Template SS confidence
		476	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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