Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMT8
Confidence61.95%DateThu Jan 5 12:38:13 GMT 2012
Rank217Aligned Residues65
% Identity22%Templatec1ea9D_
PDB info PDB header:hydrolaseChain: D: PDB Molecule:cyclomaltodextrinase; PDBTitle: cyclomaltodextrinase
Resolution3.2 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   247..250.........260 .........270.........280 ....
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Query Sequence  VYLSLNDFGMGYAE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSHLQNIPFSYVNLHKTMFH. . . . . . . . . . . . DIES
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Template Sequence  YQIFPERFANGDTRNDPEGTLPWGSADPTPSCFFGGDLQGVIDHLDHLSKLGVNAVYFTPLFKATTNHKYDTEDYFQIDP
Template Known Secondary structure 

GGGT



S
S
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SSS


SS





ST
TTTTTTT







SSSTTS
S
T
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   134.....140.........150.........160.........170.........180.........190.........200.........210...
 
   285....290.........300.........310.
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Query Sequence  NSLTDIIATTIIDLSKQLHIDVIADGI
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Template Sequence  QFGDKDTLKKLVDLCHERGIRVLLDAV
Template Known Secondary structure  TT

TTT


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   214.....220.........230.........240
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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