 |
Job Description | P0AE98 | Confidence | 5.22% | Date | Thu Jan 5 11:22:50 GMT 2012 |
Rank | 42 | Aligned Residues | 41 |
% Identity | 22% | Template | d1g5ga1 |
SCOP info | Head and neck region of the ectodomain of NDV fusion glycoprotein
| Head and neck region of the ectodomain of NDV fusion glycoprotein
| Head and neck region of the ectodomain of NDV fusion glycoprotein
|
Resolution | 3.30 |
|
  |   |
93 | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | |
|
. | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
|  |  |  |  |  |  |  |
|
| . | . |
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | R | M | V | T | N | D | Y | I | V | D | I | A | N | R | D | . |
. |
G | Q | L | Q | L | N | V | T | D | R | K | T | G | Q | T | S | T | I | Q | V | S | G | L | Q | N |
Query Conservation |   |
|
|   |   |
|
|
|   |   |
|   |
|   |   |   |   | . | . |
|   |
|   |
|   |
|
|
|   |   |
|
|
|   |
|   |
|   |
|   |
|
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
G | I | V | V | T | G | D | K | A | V | N | I | Y | T | S | S | Q | T | G | S | I | I | I | K | L | L | Q | I | T | S | P | A | L | T | Q | L | T | I | Q | A | L | Y | N |
Template Known Secondary structure |   |
T |  |  |  |  |  |  |  |  |  |  |  |
|
| S |
|
|
|  |  |  |  |  |  |
|
|
| T | T |
| S | S |
|  |  |
|
|  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
41 | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|