Return to main results Retrieve Phyre Job Id

Job DescriptionP0AE98
Confidence3.21%DateThu Jan 5 11:22:50 GMT 2012
Rank75Aligned Residues31
% Identity26%Templatec3ohnA_
PDB info PDB header:membrane proteinChain: A: PDB Molecule:outer membrane usher protein fimd; PDBTitle: crystal structure of the fimd translocation domain
Resolution3.01 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100... ......110.........120.........
Predicted Secondary structure 

...








Query SS confidence 





. . .

























Query Sequence  NDYIVD. . . IANRDGQLQLNVTDRKTGQTSTIQVS
Query Conservation 

  
 ...
    
 
 
 


  


 
 
 
 
Alig confidence 





...













.










Template Conservation 
 
 
       
     
 
  .  
        
Template Sequence  GPFTINDIYAAGNSGDLQVTIKE. ADGSTQIFTVP
Template Known Secondary structure 





TTTTS
.SSS

Template Predicted Secondary structure 






.



Template SS confidence 


































   283......290.........300..... ....310......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions