Job Description P10441 Confidence 98.70% Date Thu Jan 5 11:32:17 GMT 2012 Rank 52 Aligned Residues 343 % Identity 10% Template c3q3hA_ PDB info PDB header:transferase Chain: A: PDB Molecule:hmw1c-like glycosyltransferase; PDBTitle: crystal structure of the actinobacillus pleuropneumoniae hmw1c2 glycosyltransferase in complex with udp-glc Resolution 2.25 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	T	E	Q	R	P	L	T	I	A	L	V	A	G	E	T	S	G	D	I	L	G	A	G	L	I	R	A	L	K	E	H	V	P	N	A	R	F	V	G	V	A	G	P	R	M	Q	A	E	G	C	E	A	W	Y	E	M	E	E	L	A	V	M	G	I	V	E	V	L	G	R	L	R	R	L	L	H	I	R	A
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	R	N	N	K	P	V	M	V	V	L	L	E	H	F	H	S	A	H	S	I	Y	R	T	H	S	T	S	M	I	A	A	R	E	H	F	Y	L	I	G	L	G	S	P	S	V	D	Q	A	G	Q	E	V	F	D	E	F	H	L	V	A	G	D	N	M	K	Q	.	.	.	.	.	.	.	.	.	.	K	L	E
Template Known Secondary structure			B	T	T	B								S	S			T	T	S													G	G	G	T									T	T	S						T	T	S	S								S	S				.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.											.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	T	K	R	F	G	E	L	K	P	D	V	F	V	G	I	D	A	P	D	F	N	I	T	L	E	G	N	L	K	K	Q	G	I	K	T	I	H	Y	V	S	P	S	V	W	A	W	R	Q	K	R	V	F	K	I	G	R	A	T	D	L	V	L	A	F	L	P	F	E	K	A	F	Y	D	K	Y	N	V	P
Query Conservation
Alig confidence																																																					.	.	.	.	.	.	.	.														.	.
Template Conservation																																																					.	.	.	.	.	.	.	.														.	.
Template Sequence		F	I	R	S	V	C	E	S	N	G	A	A	I	F	Y	M	P	S	I	G	M	D	M	T	T	I	F	A	S	N	T	R	L	A	P	I	Q	A	I	A	L	G	H	P	A	T	T	H	S	D	F	.	.	.	.	.	.	.	.	I	E	Y	V	I	V	E	D	D	Y	V	G	S	.	.	E	E	C	F	S	E
Template Known Secondary structure											T		S					S			S	S	S							T	T	S			S	S							S	S		S					T	T	.	.	.	.	.	.	.	.								G	G	G		S		.	.	G	G	G		S	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.	.														.	.
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.									380	.	.	.	.	.	.	.	.	.	390	.	.			.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		C	R	F	I	G	H	T	M	A	D	A	M	P	L	D	P	D	K	N	A	A	R	D	V	L	G	I	P	H	D	A	H	C	L	A	L	L	P	G	S	R	G	A	E	V	E	M	L	S	A	D	F	L	K	T	A	Q	L	L	R	Q	T	Y	P	D	L	E	I	V	V	P	L	V	N	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence					.	.	.	.																																																																				.	.	.	.	.	.
Template Conservation					.	.	.	.
Template Sequence		T	L	L	.	.	.	.	R	L	P	K	D	A	L	P	Y	V	P	S	A	L	A	P	E	K	V	D	Y	L	L	R	E	N	P	E	V	V	N	I	G	I	A	S	T	T	M	K	L	N	P	Y	F	L	E	A	L	K	A	I	R	D	R	A	K	V	K	V	H	F	H	F	A	L	G	Q	S	N	G	I	T
Template Known Secondary structure					.	.	.	.				T	T	S	S						T	T			S	S							S			S										S	T	T																	S	S										T			T	T	T
Template Predicted Secondary structure					.	.	.	.
Template SS confidence
		399	400	.					.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.					.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310
Predicted Secondary structure																																								.	.	.	.
Query SS confidence																																								.	.	.	.
Query Sequence		A	K	R	R	E	Q	F	E	R	I	K	A	E	V	A	P	D	L	S	V	H	L	L	D	G	M	G	R	E	A	M	V	A	S	D	A	A	L	.	.	.	.	L	A	S	G	T	A	A	L	E	C	M	L	A	K	C	P	M	V	V	G	Y	R	M	K	P	F	T	F	W	L	A	K	R	L	V	K	T	D
Query Conservation																																								.	.	.	.
Alig confidence																																								.	.	.	.																																						.
Template Conservation																																																																																	.
Template Sequence		H	P	Y	V	E	R	F	I	K	S	Y	L	G	D	S	A	T	A	H	P	H	S	P	Y	H	Q	Y	L	R	I	L	H	N	C	D	M	M	V	N	P	F	P	F	G	N	T	N	G	I	I	D	M	V	T	L	G	L	V	G	V	C	K	T	G	A	E	V	H	E	H	I	D	E	G	L	F	K	R	L	.
Template Known Secondary structure														G	G	G																		T		S						S	S	S			S									T	T									S	S													T	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		475	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.
		311	.	.	.	.	.		.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360			.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure								.																																													.	.
Query SS confidence								.																																													.	.
Query Sequence		Y	V	S	L	P	N	.	L	L	A	G	R	E	L	V	K	E	L	L	Q	E	E	C	E	P	Q	K	L	A	A	A	L	L	P	L	L	A	N	G	K	T	S	H	A	M	H	D	T	F	R	E	.	.	L	H	Q	Q	I	R	C	N	A	D	E	Q	A	A	Q	A	V	L	E	L	A	Q
Query Conservation								.																																													.	.
Alig confidence		.	.					.					.	.	.	.	.	.	.	.	.	.	.	.																													.	.
Template Conservation		.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	G	L	P	E	W	L	I	A	N	.	.	.	.	.	.	.	.	.	.	.	.	T	V	D	E	Y	V	E	R	A	V	R	L	A	E	N	H	Q	E	R	L	E	L	R	R	Y	I	I	E	N	N	G	L	N	T	L	F	T	G	D	P	R	P	M	G	Q	V	F	L	E	K	L	N
Template Known Secondary structure		.	.	T			G	G	G			S	.	.	.	.	.	.	.	.	.	.	.	.	S																												S		T							S			T
Template Predicted Secondary structure		.	.										.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
				554	.	.	.	.	.	560	.	.													.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions