Job Description P10441 Confidence 99.88% Date Thu Jan 5 11:32:17 GMT 2012 Rank 29 Aligned Residues 341 % Identity 11% Template c3othB_ PDB info PDB header:transferase/antibiotic Chain: B: PDB Molecule:calg1; PDBTitle: crystal structure of calg1, calicheamicin glycostyltransferase, tdp2 and calicheamicin alpha3i bound form Resolution 2.30 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.																										.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	I	A	L	V	A	G	E	T	S	G	D	I	L	G	.	A	G	L	I	R	A	L	K	E	H	V	P	N	A	R	F	V	G	V	A	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	R	M	Q	A	E	G	C	E	A	W	Y	E	M	E	E	L
Query Conservation																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	R	V	L	F	A	S	L	G	T	H	G	H	T	Y	P	L	L	P	L	A	T	A	A	R	A	A	G	H	E	V	T	F	A	T	G	E	G	F	A	G	T	L	R	K	L	G	F	E	P	V	A	T	G	X	P	V	F	D	G	F	L	A	A	L	R	I	R	F	D	T	D	S	P	E	G	L	T	P	E
Template Known Secondary structure										S	S					G	G	G										T	T									G	G	G							T	T							S																S		S			T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		A	V	M	G	I	V	E	V	L	G	R	L	R	R	L	L	H	I	R	A	D	L	T	K	R	F	G	E	L	K	P	D	V	F	V	G	I	D	A	P	D	F	N	I	T	L	E	G	N	L	K	K	Q	G	I	K	T	I	H	Y	V	S	P	S	V	W	A	W	R	Q	K	R	V	F	K	I	G	R	A	T
Query Conservation
Alig confidence																																										.
Template Conservation																																										.
Template Sequence		Q	L	S	E	L	P	Q	I	V	F	G	R	V	I	P	Q	R	V	F	D	E	L	Q	P	V	I	E	R	L	R	P	D	L	V	V	Q	E	I	S	N	.	Y	G	A	G	L	A	A	L	K	A	G	I	P	T	I	C	H	G	V	G	R	D	T	P	D	D	L	T	R	S	I	E	E	E	V	R	G	L	A
Template Known Secondary structure				T	T								T																				S						T	T		.											T									S					S
Template Predicted Secondary structure																																										.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120		.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
																			141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	L	V	L	A	F	L	P	F	E	K	A	F	Y	D	K	Y	N	V	P	C	R	F	I	G	H	T	M	A	D	A	M	P	L	D	P	D	K	N	A	A	R	D	V	L	G	I	P	H	D	A	H	C	L	A	L	L	P	G	S	R	G	A
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.	.	.
Template Sequence		Q	R	L	G	L	D	L	P	P	G	R	I	D	G	F	G	N	P	F	I	D	I	F	P	P	S	L	Q	E	P	E	F	R	A	R	P	R	R	H	E	L	R	P	V	P	F	A	E	Q	G	D	L	P	A	.	.	.	.	.	.	.	.	W	L	S	S	R	D	T	A	R	P	L	V	Y	L	T	L	G	T
Template Known Secondary structure					T					S	S			G	G	G	G							S		T	T	T	S						T		T	T																	G	.	.	.	.	.	.	.	.	G	G	G	G	S		T	T	S								T	T
Template Predicted Secondary structure																																																								.	.	.	.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.									.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		E	V	E	M	L	S	A	D	F	L	K	T	A	Q	L	L	R	Q	T	Y	P	D	L	E	I	V	V	P	L	V	N	A	K	R	R	E	Q	F	E	R	I	K	A	E	V	A	P	D	L	S	V	H	L	L	D	G	M	G	R	E	A	M	V	A	S	D	A	A	L	L	.	A	S	G	T	A	A	L	E	C
Query Conservation																																																																								.
Alig confidence																																						.	.	.	.	.	.	.																												.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		S	S	G	G	T	V	E	V	L	R	A	A	I	D	G	L	A	G	L	D	A	D	V	L	V	A	S	G	P	S	L	D	V	S	G	L	.	.	.	.	.	.	.	G	E	V	P	A	N	V	R	L	E	S	W	V	P	Q	A	A	L	L	P	H	V	D	L	V	V	H	H	G	G	S	G	T	T	L	G	A
Template Known Secondary structure		T	T	S															T	S	S	S							T	T	T				T	T		.	.	.	.	.	.	.					T	T					S								G	G	G		S					S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.								.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		283	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360
Predicted Secondary structure																																																					.	.
Query SS confidence																																																					.	.
Query Sequence		M	L	A	K	C	P	M	V	V	G	Y	R	M	K	P	F	T	F	W	L	A	K	R	L	V	K	T	D	Y	V	S	L	P	N	L	L	A	G	R	E	L	V	K	E	L	L	Q	E	E	C	E	.	.	P	Q	K	L	A	A	A	L	L	P	L	L	A	N	G	K	T	S	H	A	M	H	D	T	F	R	E
Query Conservation																																																					.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.										.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Sequence		L	G	A	G	V	P	Q	L	S	F	P	W	A	G	D	S	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	N	A	Q	A	V	A	Q	A	G	.	.	A	G	D	H	L	L	P	D	N	I	S	P	D	S	V	S	G	A	A	K	R	L	L	A	E	E	S	Y	R	A	G	A	R	A	V	A	A	E
Template Known Secondary structure				T	T									S	T	T			.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	.	.	S						G	G	G		S															T
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.														.	.	.	.	.	.	.	.	330	.			.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
		361	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	Q	Q	I	R	C	N	A	D	E	Q	A	A	Q	A	V	L	E	L	A
Query Conservation
Alig confidence						.	.	.
Template Conservation						.	.	.
Template Sequence		I	A	A	X	.	.	.	P	G	P	D	E	V	V	R	L	L	P	G	F	A
Template Known Secondary structure					S	.	.	.							G	G	G
Template Predicted Secondary structure						.	.	.
Template SS confidence
		370	.	.	.				.	.	.	.	.	.	380	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions