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Job DescriptionP10441
Confidence99.97%DateThu Jan 5 11:32:17 GMT 2012
Rank6Aligned Residues351
% Identity15%Templatec3dzcA_
PDB info PDB header:isomeraseChain: A: PDB Molecule:udp-n-acetylglucosamine 2-epimerase; PDBTitle: 2.35 angstrom resolution structure of wecb (vc0917), a udp-n-2 acetylglucosamine 2-epimerase from vibrio cholerae.
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40... ......50.........60.........70.........80.
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Query Sequence  QRPLTIALVAGETSGDILGAGLIRALKEHVPNARFVGVAG. . PRMQAEGCEAWYEMEELAVMGIVEVLGRLRRLLHIRAD
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Template Sequence  MK. . KVLIVFGTRPEAIKMAPLVQQLCQDNRFVAKVCVTGQHREMLDQVLELFSITPDFDLNIMEPGQTLNGVTSKILLG
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Query Sequence  LTKRFGELKPDVFVGIDAPDFNITLEGNLKKQGIKTIHYVSPSVWA. . . . . . WRQKRVFKIGRATDLVLAFLPFEKAFYD
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Template Sequence  MQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHVEAGLRTGNIYSPWPEEGNRKLTAALTQYHFAPTDTSRANLL
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   7980.........90.........100.........110.........120.........130.........140.........150........
 
   156...160.........170....... ..180.........190.........200.........210.........220....
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Query Sequence  KYNVPCRFIGHTMADAMPLDPD. . . . . . . . . . . KNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFLKTAQLLRQTYP
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Template Sequence  QENYNAENIFVTGNTVIDALLAVREKIHTDMDLQATLESQFPMLDASKKLILVTGHRRESFGGGFERICQALITTAEQHP
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GGG



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   159160.........170.........180.........190.........200.........210.........220.........230........
 
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Query Sequence  DLEIVVPLVNAKRREQFERIKAEVAPDLSVHL. . LDGMGREAMVASDAALLASGTAALECMLAKCPMVVGYRMKPFTFWL
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Template Sequence  ECQILYPVHLNPNVREPVNKLLKGVSNIVLIEPQQYLPFVYLMDRAHIILTDSGGIQEEAPSLGKPVLVMRETTERPEAV
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SGGGTTGGGGT



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   239240.........250.........260.........270.........280.........290.........300.........310........
 
   303......310.........320.........330.........340.........350.........360.........370.........
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Query Sequence  AKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFRELHQQIRCNADEQAAQAVLE
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Template Sequence  AAG. . . . . . . . . . . . . . . . . . . TVKLVGT. NQQQICDALSLLLTDPQAYQAMSQAHNPY. . . GDGKACQRIADILAK
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   319320. ....... .330.........340.........350....... ..360.........370..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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