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Job DescriptionP10441
Confidence99.86%DateThu Jan 5 11:32:17 GMT 2012
Rank32Aligned Residues316
% Identity13%Templatec2q6vA_
PDB info PDB header:transferaseChain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp
Resolution2.28 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10........ .20.........30.........40.........50.........60.
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Query Sequence  RPLTIALVAGETSG. . DILGAGLIRALKEHVPNARFVGVAGPRMQAEGCEAWYEMEELA. . . . . . . . . . . . . . . . . . . . .
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Template Sequence  RPCYLVLSSHDFRTPRRANIHFITDQLALRG. TTRFFSLRYSRLSRMKGDMRLPLDDTANTVVSHNGVDCYLWRTTVHPF
Template Known Secondary structure 


SS
TT
SS

S.

S
BSGGGTTT
TTGGGGGGTTSTT

BSS


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   14.....20.........30.........40.... .....50.........60.........70.........80.........90..
 
   62.......70.........80.........90.........100.........110.........120....... ..130...
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Query Sequence  . . . VMGIVEVLGRLRRLLHIRADLTKRFGELKPDVFVGIDAPDFNITLEGNLKKQGIKTIHYVSPSVWA. . . . . WRQKRV
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Template Sequence  NTRRSWLRPVEDAMFRWYAAHPPKQLLDWMRESDVIVFESGIAVAFIELAKRVNPAAKLVYRASDGLSTINVASYIEREF
Template Known Secondary structure 

S
GGG



SSSGGGGG
TTSSS
TTTTT

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   93......100.........110.........120.........130.........140.........150.........160.........170..
 
   134.....140.........150.........160.........170.........180.........190.........200.........210...
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Query Sequence  FKIGRATDLVLAFLPFEKAFYDKYNVPCRFIGHTMADAMPLDPDKNAARDVLGIPHDAHCLALLPGSRGAEVEMLSADFL
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Template Sequence  DRVAPTLDVIALVSPAMAAEVVSRD. NVFHVGHGVDHNLDQLGD. . . . . . . . . . . . PSPYAEGIHAVAVGSMLFDPEFFV
Template Known Secondary structure  GGG
SS
GGGGGG
S
ST.T



B
TTT
............S
S

SS

TTB
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   173......180.........190....... ..200.........210..... ....220.........230.........
 
   214.....220.........230.........240.........250.........260.........270..... ....280.
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Query Sequence  KTAQLLRQTYPDLEIVVPLVNAKRREQFERIKAEVAPDLSVHLLDGMGREAMVASDAALLAS. . . . . . . . . . . . GTAALE
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Template Sequence  VASKAF. . . . PQVTFHVIGSGMG. . . . . RHPGYGDNVIVYGEMKHAQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQ
Template Known Secondary structure 
....TTS
SS
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TT

TT



T
S

BS
S
S
TT
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   240..... ....250........ .260.........270.........280.........290.........300.........310
 
   282.......290.........300.........310.........320.........330.........340.........350.........360.
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Query Sequence  CMLAKCPMVVGYRMKPFTFWLAKRLVKTDYVSLPNLLAGRELVKELLQEECEPQKLAAALLPLLANGKTSHAMHDTFREL
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Template Sequence  YDFFGLPAVCPNAVVGPYK. . . . . . . . . . . . . . . . . . . . . . . . SRFGYTPGNADSVIAAITQALEAPRVRYR. . . . . . . .
Template Known Secondary structure  TT

GGGT
S
S........................S
TT






S........
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   311........320......... 330.........340.........350........
 
   362.......370.........
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Query Sequence  HQQIRCNADEQAAQAVLE
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Template Sequence  . . . . QCLNWSDTTDRVLD
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B
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   359360.........370..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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