Job Description P10441 Confidence 99.87% Date Thu Jan 5 11:32:17 GMT 2012 Rank 31 Aligned Residues 344 % Identity 13% Template c2p6pB_ PDB info PDB header:transferase Chain: B: PDB Molecule:glycosyl transferase; PDBTitle: x-ray crystal structure of c-c bond-forming dtdp-d-olivose-transferase2 urdgt2 Resolution 1.88 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.		.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40																		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.
Predicted Secondary structure																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	I	A	L	V	A	G	E	T	S	G	D	I	L	G	.	A	G	L	I	R	A	L	K	E	H	V	P	N	A	R	F	V	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	A	G	P	R	M	Q	A	E	G	C	E	A	W	Y	E	M	E	E	L	A	V	M	G	I	V	E	V
Query Conservation																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																		.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	R	I	L	F	V	A	A	G	S	P	A	T	V	F	A	L	A	P	L	A	T	A	A	R	N	A	G	H	Q	V	V	M	A	A	N	Q	D	M	G	P	V	V	T	G	V	G	L	P	A	V	A	T	T	D	L	P	I	R	H	F	I	T	T	D	R	E	G	R	P	E	A	I	P	S	D	P	V	A	Q
Template Known Secondary structure										S	S																	T	T									G	G	G						T	T	T						S		S	S		G	G	G	G	S		B		T	T	S		B					S	S
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		69	70	.	.	.	.	.	.						.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure										.	.	.	.	.
Query SS confidence										.	.	.	.	.
Query Sequence		L	G	R	L	R	R	L	L	.	.	.	.	.	H	I	R	A	D	L	T	K	R	F	G	E	L	K	P	D	V	F	V	G	I	D	A	P	D	F	N	I	T	L	E	G	N	L	K	K	Q	G	I	K	T	I	H	Y	V	S	P	S	V	W	A	W	R	Q	K	R	V	F	K	I	G	R	A	T	D	L	V
Query Conservation										.	.	.	.	.
Alig confidence										.	.	.	.	.																									.
Template Conservation																																							.
Template Sequence		A	R	F	T	G	R	W	F	A	R	M	A	A	S	S	L	P	R	M	L	D	F	S	R	A	W	R	P	D	L	I	V	G	G	T	M	S	.	Y	V	A	P	L	L	A	L	H	L	G	V	P	H	A	R	Q	T	W	D	A	V	D	A	D	G	I	H	P	G	A	D	A	E	L	R	P	E	L	S	E	L
Template Known Secondary structure																														S						T	T		.	T										T								S	S	S				T	T	T								T							T
Template Predicted Secondary structure																																							.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	F	L	P	F	E	K	A	F	Y	D	K	Y	N	V	P	C	R	F	I	G	H	T	M	A	D	A	M	P	L	D	P	D	K	N	A	A	R	D	V	L	G	I	P	H	D	A	H	C	L	A	L	L	P	G	S	R	G	A	E	V	E	M	L	S	A	D	F	L	K	T	A	Q	L	L	R	Q	T	Y
Query Conservation
Alig confidence																																																																													.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		G	L	E	R	L	P	A	P	D	L	F	I	D	I	C	P	P	S	L	R	P	A	N	A	A	P	A	R	M	M	R	H	V	A	T	S	R	Q	C	P	L	E	P	W	M	Y	T	R	D	T	R	Q	R	V	L	V	T	S	G	D	R	N	F	D	F	L	R	G	L	A	K	D	L	V	R	.	.	.	.	.
Template Known Secondary structure		T		S	S					S						S		G	G	G	S		S	S																				G	G	G	G				S	S																									.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.		.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		P	D	L	E	I	V	V	P	L	V	N	A	K	R	R	E	Q	F	E	R	I	K	A	E	V	A	P	D	L	S	V	H	L	L	D	G	M	G	R	E	A	M	V	A	S	D	A	A	L	L	.	A	S	G	T	A	A	L	E	C	M	L	A	K	C	P	M	V	V	G	Y	R	M	K	P	F	T	F	W	L
Query Conservation																																																				.
Alig confidence																										.	.	.	.	.	.	.																				.																							.
Template Conservation																										.	.	.	.	.	.	.																																											.
Template Sequence		W	D	V	E	L	I	V	A	A	P	D	T	V	A	E	A	L	R	A	E	V	P	Q	A	.	.	.	.	.	.	.	R	V	G	W	T	P	L	D	V	V	A	P	T	C	D	L	L	V	H	H	A	G	G	V	S	T	L	T	G	L	S	A	G	V	P	Q	L	L	I	P	K	G	.	S	V	L	E	A	P
Template Known Secondary structure		T	T																				T	T	S	.	.	.	.	.	.	.			S								G	G	G		S							S		S									T									S	.
Template Predicted Secondary structure																										.	.	.	.	.	.	.																																											.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.								.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.		.	310	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.			.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380
Predicted Secondary structure																																	.	.
Query SS confidence																																	.	.
Query Sequence		A	K	R	L	V	K	T	D	Y	V	S	L	P	N	L	L	A	G	R	E	L	V	K	E	L	L	Q	E	E	C	E	.	.	P	Q	K	L	A	A	A	L	L	P	L	L	A	N	G	K	T	S	H	A	M	H	D	T	F	R	E	L	H	Q	Q	I	R	C	N	A	D	E	Q	A	A	Q	A	V	L	E	L
Query Conservation																																	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.										.	.																																.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template Sequence		A	R	R	V	A	D	Y	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	A	I	A	L	L	P	G	E	D	S	T	E	A	I	A	D	S	C	Q	E	L	Q	A	K	D	T	Y	A	R	R	A	Q	D	L	S	R	E	I	S	G	M	.	.	.	P	L	P	A	T	V	V	T	A	L	E	Q	L
Template Known Secondary structure									T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						T	T	T																																T	S	.	.	.
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.																																											.	.	.
Template SS confidence
		315	.	.	.	.	320	.	.															.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.				.	.	.	.	.	370	.	.	.	.	.	.	.
		381
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		378

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions