Return to main results Retrieve Phyre Job Id

Job DescriptionP10441
Confidence71.47%DateThu Jan 5 11:32:17 GMT 2012
Rank428Aligned Residues34
% Identity32%Templatec2dlnA_
PDB info PDB header:ligase(peptidoglycan synthesis)Chain: A: PDB Molecule:d-alanine--d-alanine ligase; PDBTitle: vancomycin resistance: structure of d-alanine:d-alanine2 ligase at 2.3 angstroms resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20 .........30.........
Predicted Secondary structure 






.....



Query SS confidence 














. . . . .


















Query Sequence  PLTIALVAGETSGDI. . . . . LGAGLIRALKEHVPNARFV
Query Conservation 



 
      
  .....    
   
   
  
 
 
Alig confidence 














.....


















Template Conservation    

 
  

   
  
 
 
   
  

   
  
  
Template Sequence  TDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPV
Template Known Secondary structure 
S


SSTTTT
Template Predicted Secondary structure 








Template SS confidence 






































   2.......10.........20.........30.........40
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions