Return to main results Retrieve Phyre Job Id

Job DescriptionQ46844
Confidence99.89%DateThu Jan 5 12:35:11 GMT 2012
Rank12Aligned Residues200
% Identity12%Templated2ocpa1
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution2.80

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   6...10.........20.........30.........40.........50.........60.........70.........80.....
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Query Sequence  PPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALV
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Template Sequence  PRRLSIEGNIAVGKSTFVKLLTKTYPEWHVATEPVATWQNIQLGNLLDMMYREPAR. . . . . . . . . . . . . . . . . . WSYTFQ
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   38.40.........50.........60.........70.........80.........90... ......
 
   86...90.........100...... ...110.........120.........130.........140.........150.........160...
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Query Sequence  ITAFVARRLLRFRHMLACRRR. . GLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIK
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Template Sequence  TFSFLSRLKVQLEPFPEKLLQARKPVQIFERSVYSDRYIFAKNLFENGSLSDIEWHIYQDWHSFLLWEFASRITLHGFIY
Template Known Secondary structure  S


S
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   112.......120.........130.........140.........150.........160.........170.........180.........190.
 
   164.....170......... 180.........190..... ....200.........210.........220...
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Query Sequence  LNVDLEVACARKPDHK. . . . . . . RESLARKIAITPQLTF. . . . . . . . . . . . GGAQLVDIDANQPLEQVLVDAEKAITDF
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Template Sequence  LQASPQVCLKRLYQRAREEEKGIELAYLEQLHGQHEAWLIHKTTKLHFEALMNIPVLVLDVNDDFSEEVTKQEDLMREV
Template Known Secondary structure 

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   192.......200.........210.........220.........230.........240.........250.........260.........270
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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