Return to main results Retrieve Phyre Job Id

Job DescriptionQ46844
Confidence99.85%DateThu Jan 5 12:35:11 GMT 2012
Rank16Aligned Residues178
% Identity20%Templated1qf9a_
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Nucleotide and nucleoside kinases
Resolution1.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40.........50.........60.........70.........80
Predicted Secondary structure 

































Query SS confidence 















































































Query Sequence  MQSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGP
Query Conservation 
    
 

 
 
 






    
   
                     
      
                     
Alig confidence 




































...........































Template Conservation 
   

  
 
 
  





    
   
    
  ...........                                
Template Sequence  MEKSKPNVVFVLGGPGSGKGTQCANIVRDFGWVHLSA. . . . . . . . . . . GDLLRQEQQSGSKDGEMIATMIKNGEIVPSIV
Template Known Secondary structure 





STTSS

...........TT
TTTT



Template Predicted Secondary structure 
















...........









Template SS confidence 















































































   1........10.........20.........30....... ..40.........50.........60.........
 
   81........90.........100.........110.........120.........130.........140.........150.........160
Predicted Secondary structure 



















Query SS confidence 















































































Query Sequence  VPALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDL
Query Conservation              
                

 

   
                                       

 
Alig confidence 




.............
























.......................













Template Conservation       .............                         .......................              
Template Sequence  TVKLL. . . . . . . . . . . . . KNAIDANQGKNFLVDGFPRNEENNN. . . . . . . . . . . . . . . . . . . . . . . SWEENMKDFVDTKF
Template Known Secondary structure  .............TSTT

T


S.......................TTT
Template Predicted Secondary structure  .............











.......................






Template SS confidence 















































































   70.... .....80.........90......... 100.........110...
 
   161........170......... 180.........190.........200.........210.........220....
Predicted Secondary structure 

................








Query SS confidence 


















. . . . . . . . . . . . . . . .












































Query Sequence  VIKLNVDLEVACARKPDHK. . . . . . . . . . . . . . . . RESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFM
Query Conservation     
         
     ................                       


    


   
   
   
Alig confidence 


















................











































.
Template Conservation               
   
                                        

     


   
   
  
.
Template Sequence  VLFFDCPEEVMTQRLLKRGESSGRSDDNIESIKKRFNTFNVQTKLVIDHYNKFDKVKIIPANRDVNEVYNDVENLFKSM.
Template Known Secondary structure 

TTS

TT
STTT

SS
T.
Template Predicted Secondary structure 





















.
Template SS confidence 















































































   114.....120.........130.........140.........150.........160.........170.........180.........190..
 
   225....
Predicted Secondary structure 


Query SS confidence 




Query Sequence  TARGY
Query Conservation       
Alig confidence  ...

Template Conservation  ...

Template Sequence  . . . GF
Template Known Secondary structure  ...T
Template Predicted Secondary structure  ...

Template SS confidence 




   193.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions