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Job DescriptionQ46844
Confidence99.92%DateThu Jan 5 12:35:11 GMT 2012
Rank10Aligned Residues196
% Identity22%Templatec3lv8A_
PDB info PDB header:transferaseChain: A: PDB Molecule:thymidylate kinase; PDBTitle: 1.8 angstrom resolution crystal structure of a thymidylate kinase2 (tmk) from vibrio cholerae o1 biovar eltor str. n16961 in complex3 with tmp, thymidine-5'-diphosphate and adp
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  PLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVI
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Template Sequence  KFIVIEGLEGAGKSTAIQVVVETLQQNGIDHITRTREPGG. . . . . . . . . . . . . TLLAEKLRALVKEEHPGEELQDITELL
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   4.....10.........20.........30.........40... ......50.........60.........70
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  TAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNV
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Template Sequence  LVYAARVQLVENVIKPALARGEWVVGDRHDMSSQAYQGGGRQIAPSTMQSLKQTAL. . . . . . . . . . . GDFKPDLTLYLDI
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   71........80.........90.........100.........110.........120...... ...130.........
 
   167..170..... ....180.........190.........200.........210.........220......
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Query Sequence  DLEVACARK. . . . PDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTA
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Template Sequence  DPKLGLERELDRIEKMDISFFERARERYLELANSDDSVVMIDAAQSIEQVTADIRRALQDWLSQ
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   140.........150.........160.........170.........180.........190.........200...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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