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Job DescriptionQ46844
Confidence99.75%DateThu Jan 5 12:35:11 GMT 2012
Rank37Aligned Residues193
% Identity13%Templatec3be4A_
PDB info PDB header:transferaseChain: A: PDB Molecule:adenylate kinase; PDBTitle: crystal structure of cryptosporidium parvum adenylate kinase cgd5_3360
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  SITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVP
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Template Sequence  NSKKHNLILIGAPGSGKGTQCEFIKKEYGLAHLST. . . . . . . . . . . GDMLREAIKNGIGLEAKSIIESGNFVGDEIV. . .
Template Known Secondary structure  GGG


TTSS

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   2.......10.........20.........30...... ...40.........50.........60.......
 
   83......90.........100.........110.........120.........130.........140.........150.. ......
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Query Sequence  ALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHW. . . . MASHKP
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Template Sequence  . . . . . . . . . . . LGLVKEKFDLGVCVNGFVLDGFPRTIPQAEGLAKILSEIGDSLTSVIYFEIDDSEIIERISGRCTHPAS
Template Known Secondary structure  ...........TTTTTT
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   70.........80.........90.........100.........110.........120.........130........
 
   159160.........170.... .....180.........190.........200.........210.........220
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Query Sequence  DLVIKLNVDLEVACAR. . . . . . . . . . . . . . . . . KPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAI
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Template Sequence  GRIYHVKYNPPKQPGIDDVTGEPLVWRDDDNAEAVKVRLDVFHKQTAPLVKFYEDLGILKRVNAKLPPKEVTEQIKKIL
Template Known Secondary structure 

TTTB

SSTTB
TTT

B
B

GGGSTTTTT
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   139140.........150.........160.........170.........180.........190.........200.........210.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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