Job Description Q46844 Confidence 99.37% Date Thu Jan 5 12:35:11 GMT 2012 Rank 81 Aligned Residues 181 % Identity 18% Template c3asyB_ PDB info PDB header:transferase Chain: B: PDB Molecule:uridine kinase; PDBTitle: ligand-free structure of uridine kinase from thermus thermophilus hb8 Resolution 2.40 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P	L	I	A	V	I	G	S	D	G	S	G	K	S	T	V	C	E	H	L	I	T	V	V	E	K	Y	G	A	A	E	R	V	H	L	G	K	Q	A	G	N	V	G	R	A	V	T	K	L	P	L	M	G	K	S	L	H	K	T	I	E	R	N	Q	V	K	T	A	K	K	L	P	G	P	V	P	A	L
Query Conservation
Alig confidence																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		K	P	F	V	I	G	I	A	G	G	T	A	S	G	K	T	T	L	A	Q	A	L	A	R	T	L	G	E	R	V	A	L	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	M	D	H	Y	Y	K	D	L	G	H	L	P	L	E	E	R	L	R	V
Template Known Secondary structure												T	T	S	S													G	G	G					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.		G	G	G		B				T	T	S		T	T	S	S	S	S	S
Template Predicted Secondary structure																																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	A	F	V	A	R	R	L	L	R	F	R	H	M	L	A	C	R	R	R	G	L	I	V	L	T	D	R	Y	P	Q	D	Q	I	P	G	A	Y	D	G	T	V	F	P	P	N	V	E	G	G	R	F	V	S	W	L	A	S	Q	E	R	K	A	F	H	W	M	A	S	H	K	P	D	L	V	I	K	L
Query Conservation
Alig confidence																																				.	.	.	.	.	.
Template Conservation																																				.	.	.	.	.	.
Template Sequence		N	Y	D	H	P	D	A	F	D	L	A	L	Y	L	E	H	A	Q	A	L	L	R	G	L	P	V	E	M	P	V	Y	D	F	R	.	.	.	.	.	.	A	Y	T	R	S	P	R	R	T	P	V	R	P	A	P	V	V	I	L	E	G	I	L	V	L	Y	P	K	E	L	R	D	L	M	D	L	K	V	F	V
Template Known Secondary structure			T	T	S	G	G	G	B														T	T										T	T	.	.	.	.	.	.	T	T													S						S	T	T	T	T	S	S					T	T		S
Template Predicted Secondary structure																																				.	.	.	.	.	.
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.							.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.												.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.					.	200	.	.	.	.	.	.	.	.				.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.
Query Sequence		N	V	D	L	E	V	A	C	A	R	K	P	D	H	.	.	.	.	.	.	.	.	.	.	.	K	R	E	S	L	A	R	K	I	A	I	T	P	Q	L	T	F	G	G	A	.	.	.	.	Q	L	V	D	I	D	A	N	Q	P	.	.	.	L	E	Q	V	L	V	D	A	E	K
Query Conservation																.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.											.	.	.
Template Conservation
Template Sequence		D	A	D	A	D	E	R	F	I	R	R	L	K	R	D	V	L	E	R	G	R	S	L	E	G	V	V	A	Q	Y	L	E	Q	V	K	P	M	H	L	H	F	V	E	P	T	K	R	Y	A	D	V	I	V	P	R	G	G	Q	N	P	V	A	L	E	M	L	A	A	K	A	L	A
Template Known Secondary structure																			T	S														T								T	T	G	G	G	G	G	G		S					S	T	T	S													T
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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