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Job DescriptionQ46844
Confidence99.70%DateThu Jan 5 12:35:11 GMT 2012
Rank47Aligned Residues182
% Identity15%Templatec2vp4D_
PDB info PDB header:transferaseChain: D: PDB Molecule:deoxynucleoside kinase; PDBTitle: structural studies of nucleoside analog and feedback2 inhibitor binding to drosophila melanogaster3 multisubstrate deoxyribonucleoside kinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  QSITPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPV
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Template Sequence  EGTQPFTVLIEGNIGSGKTTYLNHFEKYKNDICLLTEPVEKWRNVNGVNLLELMY. . . . . . . . . . . . . . . . . . . . . . . KD
Template Known Secondary structure  TT



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TTGGGTTT

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   16...20.........30.........40.........50.........60.........70 ..
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  PALVITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLV
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Template Sequence  PKKWAMPFQSYVTLTMLQSHTAPTNKKLKIMERSIFSARYCFVENMRRNGSLEQGMYNTLEEWYKF. . IEESIHVQADLI
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   73......80.........90.........100.........110.........120.........130........ .140.........150
 
   162.......170.........180. ........190..... ....200........
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Query Sequence  IKLNVDLEVACARKPDHKRE. . . . . . . SLARKIAITPQLTF. . . . . . GGAQLVDIDANQP
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Template Sequence  IYLRTSPEVAYERIRQRARSEESCVPLKYLQELHELHEDWLIHQRRPQSCKVLVLDADLN
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   151........160.........170.........180.........190.........200.........210
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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