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Job DescriptionQ46844
Confidence99.77%DateThu Jan 5 12:35:11 GMT 2012
Rank31Aligned Residues168
% Identity11%Templatec2ql6H_
PDB info PDB header:signaling protein,transferaseChain: H: PDB Molecule:nicotinamide riboside kinase 1; PDBTitle: human nicotinamide riboside kinase (nrk1)
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.........20.........30.........40.........50.........60.........70.........80....
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Query Sequence  TPPLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPAL
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Template Sequence  KTFIIGISGVTNSGKTTLAKNLQKHLPNCSVIS. . . . . . . . . . . . . . . . . . . . . . . . QDDFFKPESEIETDKNGFLQYDV
Template Known Secondary structure 

STTSSSTT........................GGGGB

GGG

B
TTS
B

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   2.......10.........20.........30.... .....40.........50.......
 
   85....90.........100.........110.........120.........130.........140.........150.........160....
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Query Sequence  VITAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKL
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Template Sequence  LEALNXEKXXSAISCWXESARHIPILIIEGFLLFNYKPLD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TIWNRSYFL
Template Known Secondary structure  GGGB
T



SS
TT
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S
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   58.60.........70.........80.........90....... ..100......
 
   165....170........ .180.........190.........200.........210.........220.......
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Query Sequence  NVDLEVACARKPDH. . . . . . . . . . . KRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTAR
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Template Sequence  TIPYEECKRRRSTRVYQPPDSPGYFDGHVWPXYLKYRQEXQDITWEVVYLDGTKSEEDLFLQVYEDLIQELAKQ
Template Known Secondary structure 

TTS

SS


TTTTTTT

S
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TT
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   119120.........130.........140.........150.........160.........170.........180.........190..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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