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Job DescriptionQ46844
Confidence99.49%DateThu Jan 5 12:35:11 GMT 2012
Rank69Aligned Residues156
% Identity15%Templatec2pt5D_
PDB info PDB header:transferaseChain: D: PDB Molecule:shikimate kinase; PDBTitle: crystal structure of shikimate kinase (aq_2177) from aquifex aeolicus2 vf5
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   910.........20.........30.........40.........50.........60.........70.........80........
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Query Sequence  IAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVITA
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Template Sequence  IYLIGFXCSGKSTVGSLLSRSLNIPFYD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . VDEEVQKREGLSIPQIFEKKG
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GGG
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   3......10.........20.........30 .........40.........50.
 
   8990.........100.........110.........120.........130.........140.........150.........160........
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Query Sequence  FVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNVDL
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Template Sequence  EAYFRKLEFEVLKDLSEKENVVISTGGGLG. . . . . . . . . . . . . . . . . . . . . . . . . . . . ANEEALNFXKSRGTTVFIDIPF
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   52.......60.........70.........80. ........90.........100...
 
   169170.........180.........190.........200.........210.........220.......
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Query Sequence  EVACARKPDHKRESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDFMTAR
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Template Sequence  EVFLERC. . RPLDEIKNLFEERRKIYSKAD. . IKVKGEKPPEEVVKEILLSLEGNALGG
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   104.....110 .........120.........130. ........140.........150........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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