Job Description Q46844 Confidence 99.91% Date Thu Jan 5 12:35:11 GMT 2012 Rank 11 Aligned Residues 189 % Identity 22% Template c2pbrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thymidylate kinase; PDBTitle: crystal structure of thymidylate kinase (aq_969) from aquifex aeolicus2 vf5 Resolution 1.96 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	I	A	V	I	G	S	D	G	S	G	K	S	T	V	C	E	H	L	I	T	V	V	E	K	Y	G	A	A	E	R	V	H	L	G	K	Q	A	G	N	V	G	R	A	V	T	K	L	P	L	M	G	K	S	L	H	K	T	I	E	R	N	Q	V	K	T	A	K	K	L	P	G	P	V	P	A	L	V	I
Query Conservation
Alig confidence																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	L	I	A	F	E	G	I	D	G	S	G	K	T	T	Q	A	K	K	L	Y	E	Y	L	K	Q	K	G	Y	F	V	S	L	Y	R	E	P	G	G	T	K	V	G	E	V	L	R	E	I	L	L	T	E	E	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	E	R	T	E	L	L
Template Known Secondary structure										T	T	S																T	T								S	S		S	S													S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.																			.	.	.	.	60	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	A	F	V	A	R	R	L	L	R	F	R	H	M	L	A	C	R	R	R	G	L	I	V	L	T	D	R	Y	P	Q	D	Q	I	P	G	A	Y	D	G	T	V	F	P	P	N	V	E	G	G	R	F	V	S	W	L	A	S	Q	E	R	K	A	F	H	W	M	A	S	H	K	P	D	L	V	I	K	L	N	V
Query Conservation
Alig confidence																																																										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	F	E	A	S	R	S	K	L	I	E	E	K	I	I	P	D	L	K	R	D	K	V	V	I	L	D	R	F	V	L	S	T	I	A	Y	Q	G	Y	G	K	G	L	D	V	E	F	I	K	N	L	N	E	F	A	T	.	.	.	.	.	.	.	.	.	.	.	R	G	V	K	P	D	I	T	L	L	L	D	I
Template Known Secondary structure														T							T	T							S										T	T	T	T																.	.	.	.	.	.	.	.	.	.	.	T	T				S
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.												.	120	.	.	.	.	.	.	.	.	.	130	.
		167	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure															.	.	.	.
Query SS confidence															.	.	.	.
Query Sequence		D	L	E	V	A	C	A	R	K	P	D	H	K	.	.	.	.	R	E	S	L	A	R	K	I	A	I	T	P	Q	L	T	F	G	G	A	Q	L	V	D	I	D	A	N	Q	P	L	E	Q	V	L	V	D	A	E	K	A	I	T	D	F	M
Query Conservation															.	.	.	.
Alig confidence															.	.	.	.
Template Conservation
Template Sequence		P	V	D	I	A	L	R	R	L	K	E	K	N	R	F	E	N	K	E	F	L	E	K	V	R	K	G	F	L	E	L	A	K	E	E	E	N	V	V	V	I	D	A	S	G	E	E	E	E	V	F	K	E	I	L	R	A	L	S	G	V	L
Template Known Secondary structure												T	T	T																						S	T	T						T	T	S														T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		132	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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