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Job DescriptionQ46844
Confidence99.73%DateThu Jan 5 12:35:11 GMT 2012
Rank40Aligned Residues178
% Identity14%Templatec2jatA_
PDB info PDB header:transferaseChain: A: PDB Molecule:deoxyguanosine kinase; PDBTitle: structure of deoxyadenosine kinase from m.mycoides with2 products dcmp and a flexible dcdp bound
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   7..10.........20.........30.........40.........50.........60.........70.........80......
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Query Sequence  PLIAVIGSDGSGKSTVCEHLITVVEKYGAAERVHLGKQAGNVGRAVTKLPLMGKSLHKTIERNQVKTAKKLPGPVPALVI
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Template Sequence  MKIAIFGTVGAGKSTISAEISKKLG. . . . . . . YEIFKEPVEENPYFEQYYKDLKKTVFKM. . . . . . . . . . . . . . . . . . . .
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   1........10.........20..... ....30.........40.........50...
 
   87..90.........100.........110.........120.........130.........140.........150.........160......
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Query Sequence  TAFVARRLLRFRHMLACRRRGLIVLTDRYPQDQIPGAYDGTVFPPNVEGGRFVSWLASQERKAFHWMASHKPDLVIKLNV
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Template Sequence  . . . . . . QIYMLTARSKQLKQLENIIFDRTLLEDPIFMKVN. . . . . . YDLNNVDQTDYNTYIDFYNNVVLLSFDIVIYLRV
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   54.....60.........70.........80....... ..90.........100.........110.........120.
 
   167..170......... 180.........190.........200.........210.........220...
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Query Sequence  DLEVACARKPDHK. . . . . . . . . . . RESLARKIAITPQLTFGGAQLVDIDANQPLEQVLVDAEKAITDF
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Template Sequence  STKTAISRIKKRGRSEELLIGEEYWETLNKNYEEFYKQNVYDFPFFVVDAELDVKTQIELIMNKLNSI
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   134.....140.........150.........160.........170.........180.........190.........200.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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