Job Description Q46844 Confidence 99.04% Date Thu Jan 5 12:35:11 GMT 2012 Rank 105 Aligned Residues 164 % Identity 15% Template c1xnjB_ PDB info PDB header:transferase Chain: B: PDB Molecule:bifunctional 3'-phosphoadenosine 5'-phosphosulfate PDBTitle: aps complex of human paps synthetase 1 Resolution 1.98 Å

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		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	P	P	L	I	A	V	I	G	S	D	G	S	G	K	S	T	V	C	E	H	L	I	T	V	V	E	K	Y	G	A	A	E	R	V	H	L	G	K	Q	A	G	N	V	G	R	A	V	T	K	L	P	L	M	G	K	S	L	H	K	T	I	E	R	N	Q	V	K	T	A	K	K	L	P	G	P	V	P	A	L
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	C	T	V	W	L	T	G	L	S	G	A	G	K	T	T	V	S	M	A	L	E	E	Y	L	V	C	H	G	I	P	C	Y	T	L	D	.	.	.	.	.	.	.	G	D	N	I	R	Q	G	L	N	K	N	L	G	F	S	P	E	D	R	E	E	N	V	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure											S	T	T	S	S															T	T								.	.	.	.	.	.	.	T	T	T						T	T	T			S	S	T	T							.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		51	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.								.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	T	A	F	V	A	R	R	L	L	R	F	R	H	M	L	A	C	R	R	R	G	L	I	V	L	T	D	R	Y	P	Q	D	Q	I	P	G	A	Y	D	G	T	V	F	P	P	N	V	E	G	G	R	F	V	S	W	L	A	S	Q	E	R	K	A	F	H	W	M	A	S	H	K	P	D	L	V	I	K	L
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	R	R	I	A	E	V	A	K	L	F	A	D	A	G	L	V	C	I	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	I	S	P	Y	T	Q	D	R	N	N	A	R	Q	I	H	E	G	A	.	.	.	.	.	.	.	.	.	S	L	P	F	F	E	V	F	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.														T							.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.	.	.	.	.	.	.	.
Template SS confidence
											111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130															.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.										150	.	.	.	.	.	.	.	.
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.								.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.																		.
Query SS confidence																									.	.	.	.	.	.	.																		.
Query Sequence		N	V	D	L	E	V	A	C	A	R	K	P	D	H	K	R	E	S	L	A	R	K	I	.	.	.	.	.	.	.	A	I	T	P	Q	L	T	F	G	G	A	Q	L	V	D	I	D	.	A	N	Q	P	L	E	Q	V	L	V	D	A	E	K	A	I	T	D
Query Conservation																									.	.	.	.	.	.	.																		.
Alig confidence																									.	.	.	.	.	.	.												.	.					.
Template Conservation																																											.	.
Template Sequence		D	A	P	L	H	V	C	E	Q	R	D	V	K	G	L	Y	K	K	A	R	A	G	E	I	K	G	F	T	G	I	D	S	E	Y	E	K	P	E	A	P	E	.	.	L	V	L	K	T	D	S	C	D	V	N	D	C	V	Q	Q	V	V	E	L	L	Q	E
Template Known Secondary structure													T	T	S							S	S		S	S	S		B	T	T	T	B						S	S		S	.	.					T	T	S	S
Template Predicted Secondary structure																																											.	.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.			200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions