Return to main results Retrieve Phyre Job Id

Job DescriptionP23872
Confidence32.36%DateThu Jan 5 11:40:10 GMT 2012
Rank269Aligned Residues42
% Identity24%Templatec3nohA_
PDB info PDB header:peptide binding proteinChain: A: PDB Molecule:putative peptide binding protein; PDBTitle: crystal structure of a putative peptide binding protein (rumgna_00914)2 from ruminococcus gnavus atcc 29149 at 1.60 a resolution
Resolution1.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   248.250.........260.. .......270.........280.........
Predicted Secondary structure 








.







Query SS confidence 














.


























Query Sequence  TREVPPCFIAGAEFD. PLLDDSRLLYQTLAAHQQPCEFKLYPG
Query Conservation      

 

  
  
.            
   
    
    
Alig confidence 














.


























Template Conservation    
     
 
 



 
  

  

 

  

  
 

 

 
Template Sequence  TDTELSFDIYVSETDYALIRYADSLCERLNDAGADVQIKQYSG
Template Known Secondary structure 
SS

TT
TT

Template Predicted Secondary structure 
















Template SS confidence 










































   86...90.........100.........110.........120........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions