Job Description P23872 Confidence 99.20% Date Thu Jan 5 11:40:10 GMT 2012 Rank 181 Aligned Residues 235 % Identity 14% Template c3kdaB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:cftr inhibitory factor (cif); PDBTitle: crystal structure of the cftr inhibitory factor cif with the h269a2 mutation Resolution 1.50 Å

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		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		R	A	Y	M	V	P	T	K	Y	G	Q	V	E	T	R	L	F	C	P	Q	P	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	A	I	E	E	I	V	A
Query Conservation
Alig confidence																			.	.	.	.														.	.	.																.	.
Template Conservation																			.	.	.	.														.	.	.																.	.
Template Sequence		E	S	A	Y	R	E	V	D	G	V	K	L	H	Y	V	K	G	.	.	.	.	G	Q	G	P	L	V	M	L	V	H	G	F	G	.	.	.	Q	T	W	Y	E	W	H	Q	L	M	P	E	L	A	K	.	.	R	F	T	V	I	A	P	D	L	P	G	L	G	Q	S	E	P	P	K	T	G	Y	S	G	E	Q
Template Known Secondary structure									T	T									.	.	.	.			S	S								T	T	.	.	.			G	G	G	G	T	T						T	T	.	.	T	S								T	T	S	T	T					S	S		S	S
Template Predicted Secondary structure																			.	.	.	.														.	.	.																.	.
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.					.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.			80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure
Query SS confidence
Query Sequence		A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		V	A	V	Y	L	H	K	L	A	R	Q	F	S	P	D	R	P	F	D	L	V	A	H	D	I	G	I	W	N	T	Y	P	M	V	V	K	.	.	.	.	.	.	.	N	Q	A	D	I	A	R	L	V	Y	M	E	A	P	I	P	D	A	R	I	Y	R	F	P	A	F	T	A	Q	G	E	S	L	V	W	H	F
Template Known Secondary structure														S	S	S	S								T					T	T							.	.	.	.	.	.	.	T	G	G	G								S	S			S	S	G	G	G	G	G	S		S			T	T				S	S	T
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.								.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		221	.	.	.	.	.	.	.	.	230	.																																																		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	Q	M	Y	E	E	A	Y	L	S	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	F	F	A	A	D	D	R	L	A	E	T	L	I	A	G	K	E	R	F	F	L	E	H	F	I	K	S	H	A	S	N	T	E	V	F	S	E	R	L	L	D	L	Y	A	R	S	Y	A	K	P	H	S	L	N	A	S	F	E	Y	Y	R	A	L	N	E	S	V	R	Q	N	A	E	L	A	K	T	R	L	Q
Template Known Secondary structure							S	T	T							T	T													T		S	S	G	G	G	S													T	S													T												T	T	S		B
Template Predicted Secondary structure
Template SS confidence
		179	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q
Query Conservation
Alig confidence																	.	.																												.	.	.	.	.
Template Conservation																	.	.																												.	.	.	.	.
Template Sequence		M	P	T	M	T	L	A	G	G	G	A	G	G	M	G	.	.	T	F	Q	L	E	Q	M	K	A	Y	A	E	D	V	E	G	H	V	L	P	G	C	G	H	W	L	P	.	.	.	.	.	E	E	C	A	A	P	M	N	R	L	V	I	D	F	L	S	R	G
Template Known Secondary structure		S									S	T	T			T	.	.	T								T	T	B	S	S							T	T			S				.	.	.	.	.			S													T	T	S
Template Predicted Secondary structure																	.	.																												.	.	.	.	.
Template SS confidence
		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300						.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions