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Job DescriptionP23872
Confidence97.36%DateThu Jan 5 11:40:10 GMT 2012
Rank241Aligned Residues218
% Identity13%Templatec3ilsA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:aflatoxin biosynthesis polyketide synthase; PDBTitle: the thioesterase domain from pksa
Resolution1.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   80.........90.........100.........110.........120.... .....130.........140.........150........
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Query Sequence  QPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYT. LSPEARFPQAIEEIVAACCYFHQQAEDYQINMSR
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Template Sequence  PMVARKTLFMLPDGG. . . GSAFSYASL. PRLKS. . DTAVVGLNCPYARDPENMNCTHGAMIESFCNEIRR. . . . RQPRGP
Template Known Secondary structure  TTTSS

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   1861........1870..... ....1880.... ..... 1890.........1900.........1910.........1920.... .....1930
 
   159160.........170.........180.........190.........200.........210 .........220.
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Query Sequence  IGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLG. . . . . . . . . . . . . . . . . GVWDGLTQQDL
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Template Sequence  YHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAPIPQAMEQLPRAFYEHCNSIGLFATQPGASPDGSTEPPSYLIPHF
Template Known Secondary structure  TTT

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   1931........1940.........1950.........1960.........1970.........1980.........1990.........2000.........2010
 
   222.......230.........240... ......250.........260.........270.........280.........
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Query Sequence  QMYEEAYLSNDADRESPYYCLF. . . . . . . . . . . . NNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPG
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Template Sequence  TAVVDVMLDYKLAPLHARRMPKVGIVWAADTVMDERDAPKMKGMHFMIQKRTEFGPDGWDTIMP. . . . . GASFDIVRADG
Template Known Secondary structure  TTT







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   2011........2020.........2030.........2040.........2050.........2060.........2070.... .....2080.....
 
   290.........300.........310.....
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Query Sequence  TLHAFLHYSRMMKTADEALRDGAQFF
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Template Sequence  ANH. FTLMQ. . KEHVSIISDLIDRVM
Template Known Secondary structure  T.TGGGS..TTTTT
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   2086.. .2090... ......2100........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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