Job Description P23872 Confidence 99.97% Date Thu Jan 5 11:40:10 GMT 2012 Rank 22 Aligned Residues 236 % Identity 12% Template c3hxkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:sugar hydrolase; PDBTitle: crystal structure of a sugar hydrolase (yeeb) from2 lactococcus lactis, northeast structural genomics3 consortium target kr108 Resolution 3.20 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	M	V	P	T	K	Y	G	Q	V	E	T	R	L	F	C	P	Q	P	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	A	I	E	E	I	V	A	A
Query Conservation
Alig confidence																																																						.
Template Conservation																																																						.
Template Sequence		N	K	S	T	F	S	L	N	D	T	A	W	V	D	F	Y	Q	L	Q	N	Y	T	F	P	A	I	I	I	C	P	G	G	G	Y	Q	H	I	S	Q	R	E	S	D	P	L	A	L	A	F	L	A	Q	.	G	Y	Q	V	L	L	L	N	Y	T	V	X	N	K	G	T	N	Y	N	F	L	S	Q	N	L	E	E
Template Known Secondary structure									B	T	T	B												B									S	T	T	T	S			G	G	G	S										T	.	T											T	T	S				S		T
Template Predicted Secondary structure																																																						.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L
Query Conservation
Alig confidence																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	Q	A	V	F	S	L	I	H	Q	N	H	K	E	W	Q	I	N	P	E	Q	V	F	L	L	G	C	S	A	G	G	H	L	A	A	W	Y	G	N	S	E	Q	I	H	R	P	K	G	V	I	L	C	Y	P	V	T	S	F	T	F	G	W	P	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure													T	T	T	T	T	B		T	T	S																	S	S	S		S	T	T			S										B	T	T	S	S		S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	.	.	P	L	L	D	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R
Query Conservation																																											.	.
Alig confidence		.	.	.	.	.																																					.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	D	L	S	H	F	N	F	E	I	E	N	I	S	E	Y	N	I	S	E	K	V	T	S	S	T	P	P	T	F	I	W	H	T	A	D	D	E	G	V	P	I	Y	N	S	L	K	Y	C	D	R	L	S	K	H	Q	V	P	F	E	A	H	F	F	E	S	G	P	H	G	V	S	L	A	N	R
Template Known Secondary structure		.	.	.	.	.	S	S	S	S	S					S			G	G	G	B	T	T	T	T			T	T	S									T	T		S	S	S		T												T	T	T									S				T	T		T	T		S	T
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
										300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	T	A	P	S	D	A	Y	C	L	P	S	V	H	R	W	V	S	W	A	S	D	W	L	E	R	Q	I
Template Known Secondary structure		T	S		S	S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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