Phyre 2 alignment of P23872 with c3g8yA

Job Description P23872
Confidence 99.18% Date Thu Jan 5 11:40:10 GMT 2012

Rank 185 Aligned Residues 247

% Identity 12% Template c3g8yA_

PDB info PDB header:hydrolase Chain: A: PDB Molecule:susd/ragb-associated esterase-like protein; PDBTitle: crystal structure of a putative hydrolase (bvu_4111) from bacteroides2 vulgatus atcc 8482 at 1.90 a resolution

Resolution 1.90 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	56	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90	.	.																.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	P	E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	D	S	P	A	T	L	F	Y	L	H	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T
Query Conservation																.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.												.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																																																																													.
Template Sequence	E	G	Y	I	L	E	K	W	E	F	Y	P	F	P	K	S	V	S	T	F	L	V	L	K	P	E	H	L	K	G	A	V	P	G	V	L	C	I	P	G	S	G	R	T	K	E	G	L	V	G	E	P	G	I	C	D	K	L	T	E	D	Y	N	N	P	K	V	S	X	A	L	N	X	V	K	E	.	G	Y	V
Template Known Secondary structure	T	T											S	T	T											T	T			S											T	T							T	T				S	S	G	G	G				T	T	S	T	T	T								T	T	.	T
Template Predicted Secondary structure																																																																													.
Template SS confidence
	106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.		.	.	.

	118	.	120	.	.	.	.	.	.	.	.	.	130																									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	V	I	G	I	D	Y	T	L	S	P	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence	A	V	A	V	D	N	A	A	A	G	E	A	S	D	L	E	C	Y	D	K	G	W	N	Y	D	Y	D	V	V	S	R	F	L	L	E	L	G	W	S	W	L	G	Y	T	S	Y	L	D	X	Q	V	L	N	W	X	K	A	Q	S	Y	I	R	K	D	R	I	V	I	S	G	F	S	L	G	T	E	P	X	X	V
Template Known Secondary structure							T	T	S	G	G	G		S	S	G	G	G	T	T	T	T	S													T	T																				T		T	T												G	G	G
Template Predicted Secondary structure
Template SS confidence
	185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

	174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P
Query Conservation
Alig confidence					.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template Sequence	L	G	V	L	.	.	.	.	.	.	.	D	K	D	I	Y	A	F	V	Y	N	D	F	L	C	Q	T	Q	E	R	A	V	V	X	T	K	P	D	K	E	N	R	R	P	F	.	.	.	.	.	.	.	P	N	S	I	R	H	L	I	P	G	Y	W	R	Y	F	N	F	P	D	V	V	A	S	L	A	P	R	P
Template Known Secondary structure					.	.	.	.	.	.	.		T	T								S		B															T	T	S					.	.	.	.	.	.	.	S	S		G	G	G			T	T	G	G	G	T									T	T	T	T	S
Template Predicted Secondary structure					.	.	.	.	.	.	.																																			.	.	.	.	.	.	.
Template SS confidence
	265	.	.	.								.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.								.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330

	254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.														.	.	310	.	.	.	.
Predicted Secondary structure																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	C	F	I	A	G	A	E	F	D	P	L	L	D	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	.	.	.	.	.	.	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	L	R	D	G	A	Q	F
Query Conservation																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.									.	.	.	.	.	.					.														.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																												.																			.
Template Sequence	I	I	F	T	E	G	G	L	D	R	D	F	R	L	V	Q	S	A	Y	A	A	S	G	K	P	E	N	.	A	E	F	H	H	Y	P	K	F	A	D	K	A	V	R	K	D	V	.	E	H	L	D	E	G	L	D	S	K	T	Y	F	E	A	V	N	V	D	P	P	S	H	Y	F	K	N	E	L	V	I	P	W
Template Known Secondary structure					S		B															T	T		G	G	G	.							G	G	G		S	G	G	G	S				.	S	S			S											T	T			G	G	G		S
Template Predicted Secondary structure																												.																			.
Template SS confidence
	331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.		.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.		.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.

	315	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	F	T	A	Q	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence	L	R	K	V	L
Template Known Secondary structure					T
Template Predicted Secondary structure
Template SS confidence
	409	410	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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