Job Description P23872 Confidence 98.74% Date Thu Jan 5 11:40:10 GMT 2012 Rank 223 Aligned Residues 207 % Identity 16% Template c3fleB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:se_1780 protein; PDBTitle: se_1780 protein of unknown function from staphylococcus epidermidis. Resolution 2.01 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.			.	.	120	.	.	.	.	.	.	.	.	.	130	.	.																				.	.	.	.	.	.	.	140	.	.	.	.
Predicted Secondary structure																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	.	.	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	A	I	E	E	I	V	A	A	C	C	Y
Query Conservation																																		.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.	.	.																			.				.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation									.	.	.																			.
Template Sequence		A	T	L	F	L	H	G	.	.	.	Y	G	G	S	E	R	S	E	T	F	X	V	K	Q	A	L	N	K	.	N	V	T	N	E	V	I	T	A	R	V	S	S	E	G	K	V	Y	F	D	K	K	L	S	A	A	N	P	I	V	K	V	E	F	K	D	N	K	N	G	N	F	K	E	N	A	Y	W	I	K	E
Template Known Secondary structure									.	.	.	T	T			G	G	G	G										T	.	T			S									T	T	S					S	S						S								S	S
Template Predicted Secondary structure									.	.	.																			.
Template SS confidence
		47	.	.	50	.	.	.				.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		V	L	S	Q	L	K	S	Q	F	.	G	I	Q	Q	F	N	F	V	G	H	S	X	G	N	X	S	F	A	F	Y	X	K	N	Y	G	D	D	R	H	L	P	Q	L	K	K	E	V	N	I	A	G	V	Y	N	G	I	L	N	X	N	E	N	V	N	E	I	I	V	D	K	Q	G	K	P	S	R	X	N	A	A
Template Known Secondary structure											.											T														T	T		T	T	S										S			T	T			B	T	T	T	B		T	T				B		S	S			B	S	S
Template Predicted Secondary structure											.
Template SS confidence
		125	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		225	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260							.	.			.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.			.	.	.	.	.	.	290	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.	.			.	.																						.	.
Query SS confidence																																						.	.	.	.	.	.			.	.																						.	.
Query Sequence		E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	.	.	.	.	.	.	F	D	.	.	P	L	L	D	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	.	.	F	K	L	Y	P	G	T	L	H	A	F
Query Conservation																																						.	.	.	.	.	.			.	.																						.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.	.	.			.	.																						.	.											.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Template Sequence		Y	R	Q	L	L	S	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	K	I	Y	C	G	K	E	I	E	V	L	N	I	Y	G	D	L	E	D	G	S	H	S	D	G	R	V	S	N	S	S	S	Q	S	L	Q	Y	L	L	R	G	S	T	K	S	Y	Q	E	X	K	F	K	G	A	K	A	Q	H	S	.
Template Known Secondary structure				T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	G	G	G	G	S	T	T	S													S	S	S	S	B	S	S	S	S	B						T							S			S									S	G	G	G	S	T	T	.
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.																																																														.
Template SS confidence
		204	.	.	.	.	.													210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F
Query Conservation
Alig confidence		.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	Q	L	H	E	N	K	D	V	A	N	E	I	I	Q	F	L
Template Known Secondary structure		.	.	.	.	.	G	G	G	S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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