Phyre 2 alignment of P23872 with c3fcyB

Job Description P23872
Confidence 99.80% Date Thu Jan 5 11:40:10 GMT 2012

Rank 67 Aligned Residues 275

% Identity 15% Template c3fcyB_

PDB info PDB header:hydrolase Chain: B: PDB Molecule:xylan esterase 1; PDBTitle: crystal structure of acetyl xylan esterase 1 from2 thermoanaerobacterium sp. jw/sl ys485

Resolution 2.10 Å

	Insertion relative to template
	Deletion relative to template
	Catalytic residue from the CSA

Detailed help on interpreting your alignment

	21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.									.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.	.	.	.		.	.	.	.	.
Predicted Secondary structure																				.															.	.	.	.	.	.	.	.																		.															.
Query SS confidence																				.															.	.	.	.	.	.	.	.																		.															.
Query Sequence	V	N	T	L	Q	P	D	L	P	P	W	P	A	T	G	T	I	A	E	.	Q	R	Q	Y	Y	T	L	E	R	R	F	W	N	A	.	.	.	.	.	.	.	.	G	A	P	E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	D	S	P	.	A	T	L	F	Y
Query Conservation																				.															.	.	.	.	.	.	.	.																		.															.
Alig confidence																				.															.	.	.	.	.	.	.	.																		.															.
Template Conservation
Template Sequence	L	Q	K	L	R	E	Y	T	G	T	N	P	C	P	E	D	F	D	E	Y	W	N	R	A	L	D	E	M	R	S	V	D	P	K	I	E	L	K	E	S	S	F	Q	V	S	F	A	E	C	Y	D	L	Y	F	T	G	V	R	G	A	R	I	H	A	K	Y	I	K	P	K	T	E	G	K	H	P	A	L	I	R
Template Known Secondary structure					T	T					S				T	T														T											S				S	S											G	G	G											S		S	S
Template Predicted Secondary structure
Template SS confidence
	8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.

	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.																									.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	E	I	V	A	A	C	C	Y	F
Query Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.
Template Sequence	F	H	G	Y	S	S	N	S	G	D	W	N	D	K	L	N	Y	V	.	.	.	.	.	A	A	G	F	T	V	V	A	M	D	V	R	G	Q	G	G	Q	S	Q	D	V	G	G	V	T	G	N	T	L	N	G	H	I	I	R	G	L	D	D	D	A	D	N	M	L	F	R	H	I	F	L	D	T	A	Q	L	A
Template Known Secondary structure				T	T			S			S	G	G	G					.	.	.	.	.	T	T	T									T	T	S	S	S	S								S	S			S	S		S	S	S	T	T	T	T	S		G	G	G
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
	88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.						.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.

	146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E
Query Conservation
Alig confidence																																	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.	.	.
Template Sequence	G	I	V	M	N	M	P	E	V	D	E	D	R	V	G	V	M	G	P	S	Q	G	G	G	L	S	L	A	C	A	A	L	.	.	.	.	.	.	.	E	P	R	V	R	K	V	V	S	E	Y	P	F	L	S	D	Y	K	R	V	W	D	L	D	L	A	K	N	A	Y	Q	E	I	T	D	Y	F	R	L	F	D
Template Known Secondary structure				T	T	S	T	T												T													.	.	.	.	.	.	.	S	T	T								S		S	S									T	T				G	G	G
Template Predicted Secondary structure																																	.	.	.	.	.	.	.
Template SS confidence
	163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.								.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

	226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure																																										.	.
Query SS confidence																																										.	.
Query Sequence	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T
Query Conservation																																										.	.
Alig confidence																																										.	.										.	.	.																			.	.	.	.	.	.	.
Template Conservation																																																					.	.	.																			.	.	.	.	.	.	.
Template Sequence	P	R	H	E	R	E	N	E	V	F	T	K	L	G	Y	I	D	V	K	N	L	A	K	R	I	K	G	D	V	L	M	C	V	G	L	M	D	Q	V	C	P	P	S	T	V	F	A	A	Y	N	N	I	.	.	.	Q	S	K	K	D	I	K	V	Y	P	D	Y	G	H	E	P	M	R	.	.	.	.	.	.	.
Template Known Secondary structure	T	T		T	T									G	G	G						G	G	G			S								T	T		S	S	S											T		.	.	.		S	S							T	T			S	S			T	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																					.	.	.																			.	.	.	.	.	.	.
Template SS confidence
	236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

	304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation
Alig confidence	.	.
Template Conservation	.	.
Template Sequence	.	.	G	F	G	D	L	A	M	Q	F	M	L	E	L	Y
Template Known Secondary structure	.	.	T										G	G	G
Template Predicted Secondary structure	.	.
Template SS confidence
			306	.	.	.	310	.	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server

Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]

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Lawrence Kelley, Benjamin Jefferys
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