Job Description P23872 Confidence 100.00% Date Thu Jan 5 11:40:10 GMT 2012 Rank 8 Aligned Residues 276 % Identity 20% Template c3ed1E_ PDB info PDB header:hydrolase receptor Chain: E: PDB Molecule:gibberellin receptor gid1; PDBTitle: crystal structure of rice gid1 complexed with ga3 Resolution 1.90 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.
Predicted Secondary structure																																														.	.	.																					.	.
Query SS confidence																																														.	.	.																					.	.
Query Sequence		A	E	Q	R	Q	Y	Y	T	L	E	R	R	F	W	N	A	G	A	P	E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	.	.	T	H	D	R	I	M	R	L	L	A	S
Query Conservation																																														.	.	.																					.	.
Alig confidence																																			.											.	.	.																					.	.
Template Conservation																																			.
Template Sequence		R	D	L	G	E	Y	L	D	R	R	V	P	A	N	A	R	P	L	E	G	V	S	S	F	D	H	I	I	D	Q	S	V	G	.	L	E	V	R	I	Y	R	A	D	A	P	A	A	E	P	F	P	V	I	I	F	F	H	G	G	S	F	V	H	S	S	A	S	S	T	I	Y	D	S	L	C	R	R	F	V	K
Template Known Secondary structure									S		B					S	S		B	T	T	B									T	T	T	T	.													S	S											S	T	T	T	S			T	T	B
Template Predicted Secondary structure																																			.
Template SS confidence
		43	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L
Query Conservation
Alig confidence																																						.																																		.	.	.
Template Conservation																																						.																																		.	.	.
Template Sequence		L	S	K	G	V	V	V	S	V	N	Y	R	R	A	P	E	H	R	Y	P	C	A	Y	D	D	G	W	T	A	L	K	W	V	M	S	Q	.	P	F	M	R	S	A	Q	A	R	V	F	L	S	G	D	S	S	G	G	N	I	A	H	H	V	A	V	R	A	A	D	E	G	.	.	.	V	K	V	C	G	N	I
Template Known Secondary structure				T	S										T	T	T	S		T	T															T		.	T	T	T	B				B																								T	T	.	.	.				S
Template Predicted Secondary structure																																						.																																		.	.	.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.				.	.	.	.	.	.	.
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.					.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																								.	.	.	.
Query SS confidence																																																								.	.	.	.
Query Sequence		L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	.	.	.	.	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	D	S
Query Conservation																																																								.	.	.	.
Alig confidence																																																								.	.	.	.
Template Conservation
Template Sequence		L	L	N	A	M	F	G	G	T	E	R	T	E	S	E	R	R	L	D	G	K	Y	F	V	T	L	Q	D	R	D	W	Y	W	K	A	Y	L	P	E	D	A	D	R	D	H	P	A	C	N	P	F	G	P	N	G	R	R	L	G	G	L	P	F	A	K	S	L	I	I	V	S	G	L	D	L	T	C	D	R	Q
Template Known Secondary structure										S	S									T	T	T	S	S														S		T	T			T	T	S	T	T	T		T	T	S	T	T					T	T	S											T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation
Alig confidence																																	.
Template Conservation																																	.
Template Sequence		L	A	Y	A	D	A	L	R	E	D	G	H	H	V	K	V	V	Q	C	E	N	A	T	V	G	F	Y	L	L	P	N	.	T	V	H	Y	H	E	V	M	E	E	I	S	D	F	L	N	A	N	L
Template Known Secondary structure											T	T									T	T			T	T	G	G	G	S	S		.	S																	T
Template Predicted Secondary structure																																	.
Template SS confidence
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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