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Job DescriptionP23872
Confidence99.21%DateThu Jan 5 11:40:10 GMT 2012
Rank176Aligned Residues223
% Identity13%Templatec3e0xB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:lipase-esterase related protein; PDBTitle: the crystal structure of a lipase-esterase related protein2 from clostridium acetobutylicum atcc 824
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   75....80.........90.........100.........110.........120.........130.........140.........150....
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Query Sequence  RLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIVAACCYFHQQAEDYQI
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Template Sequence  YVHVGNKKSPNTLLFVHGSG. . . CNLKIFGELEKYL. . . EDYNCILLDLKGHGESKGQCPSTVYGYIDNVANFITNSEVT
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TT
S


TT...

GGGGTTGGGG
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TTSTT

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TTT
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   4.....10.........20... ......30...... ...40.........50.........60.........70.......
 
   155....160.........170.........180.........190.........200.........210.........220.........230.
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Query Sequence  NMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSN. . .
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Template Sequence  KHQKNITLIGYSXGGAIVLGVALK. . . . . KLPNVRKVVSLSGGARFDKLDKDFXEKIYHNQLDNNYLLECIGGIDNPLSE
Template Known Secondary structure  TT
S
TT.....T
TTS

SB
TTS
TT


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S
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   78.80.........90.........100. ........110.........120.........130.........140.........150..
 
   232.......240.........250.........260.........270.........280.........290........
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Query Sequence  . . . . . . . . . . . . . DADRESPYYCLFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYS
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Template Sequence  KYFETLEKDPDIXINDLIACKLIDLVDNLKNIDIPVKAIVAKDELLTL. . VEYSEIIKKEVENSELKIFETGKHFLL. . .
Template Known Secondary structure  TTS
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B
GGGGGG

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   153......160.........170.........180.........190.........200 .........210.........220.......
 
   299300.........310.....
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Query Sequence  RMMKTADEALRDGAQFF
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Template Sequence  . . VVNAKGVAEEIKNFI
Template Known Secondary structure  ..TTT
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   228.230.........240..
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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