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Job DescriptionP23872
Confidence97.66%DateThu Jan 5 11:40:10 GMT 2012
Rank238Aligned Residues207
% Identity13%Templatec3ds8A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:lin2722 protein; PDBTitle: the crysatl structure of the gene lin2722 products from listeria2 innocua
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   86...90.........100.........110.... .....120.........130. ........140...
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Query Sequence  TLFYLHGGGFILGNLDTHDRIMRLLASYS. . . . . . . . . . . . . . QCTVIGIDYTLSPEARF. . . . . . . . PQAIEEIVAACC
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Template Sequence  PIILIHG. . . SGGNASSLDKXADQLXNEYRSSNEALTXTVNSEGKIKFEGKLTKDAKRPIIKFGFEQNQATPDDWSKWLK
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   5....10. ........20.........30.........40.........50.........60.........70.........80.
 
   144.....150.........160.........170.........180.........190.........200.........210.........220...
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Query Sequence  YFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQM
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Template Sequence  IAXEDLKSRYG. . FTQXDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNGXDLSFKKLPNSTPQXD
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   82.......90.. .......100.........110.........120.........130.........140.........150.........
 
   224.....230.........240.........250.........260. ..... ...270.........280.. .......290...
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Query Sequence  YEEAYLSNDADRESPYYCLFNNDLTREVPPCFIAGAEF. . . . . . DPLLD. DSRLLYQTLAAHQQPC. . . EFKLYPGTLHA
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Template Sequence  YFIKNQTEVSPD. . . . . . . . . . . . . . . . LEVLAIAGELSEDNPTDGIVPTISSLATRLFXPGSAKAYIEDIQVGEDAVHQ
Template Known Secondary structure  TGGGS
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SBTTB
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SSSBTGGGGTSBTTBSSGGG
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   160.........170. ........180.........190.........200.........210.........220...
 
   294.....300.........310.........
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Query Sequence  FLHYSRMMKTADEALRDGAQFFTAQL
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Template Sequence  T. . . . . . LHETPKSIEKTYWFLEKFK
Template Known Secondary structure  G......GGGST

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   224 .....230.........240...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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