Job Description P23872 Confidence 98.95% Date Thu Jan 5 11:40:10 GMT 2012 Rank 214 Aligned Residues 202 % Identity 13% Template c3bdiA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:uncharacterized protein ta0194; PDBTitle: crystal structure of predicted cib-like hydrolase (np_393672.1) from2 thermoplasma acidophilum at 1.45 a resolution Resolution 1.45 Å

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		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	T	R	A	Y	M	V	P	T	K	Y	G	Q	V	E	T	R	L	F	C	P	Q	P	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	A	I	E	E	I
Query Conservation
Alig confidence																	.																					.																			.
Template Conservation																	.																					.																			.
Template Sequence		A	L	Q	E	E	F	I	D	V	N	G	T	R	V	F	.	Q	R	K	X	V	T	D	S	N	R	R	S	I	A	L	F	H	G	Y	S	.	F	T	S	X	D	W	D	K	A	D	L	F	N	N	Y	S	K	I	.	G	Y	N	V	Y	A	P	D	Y	P	G	F	G	R	S	A	S	S	E	K	Y	G	I	D
Template Known Secondary structure											T	T					.							T	T											T	T	.			G	G	G	G	G	G	G	T							T	T	.	T									T	T	S	T	T	S				T	T	T			T
Template Predicted Secondary structure																	.																					.																			.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.		.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.		.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q
Query Conservation
Alig confidence																																											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	G	D	L	K	H	A	A	E	F	I	R	D	Y	L	K	A	N	G	V	A	R	S	V	I	X	G	A	S	X	G	G	G	X	V	I	X	T	T	L	Q	.	.	.	.	Y	P	D	I	V	D	G	I	I	A	V	A	P	A	W	V	E	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		T																	T	T		S	S							T													.	.	.	.		G	G	G								S			S		G	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																											.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.					120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.
Query SS confidence																																																		.	.
Query Sequence		Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H
Query Conservation																																																		.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.										.	.	.	.																	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.																	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	K	G	D	X	K	K	I	R	Q	K	T	L	L	V	W	G	S	K	D	H	V	V	P	I	A	L	S	K	E	Y	A	S	I	I	.	.	.	.	S	G	S	R	L	E	I	V	E	G	S	G	H	P	V	Y	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G					T	T			S								T	T		T	T	T	T											S	.	.	.	.	T	T							T	T			S				.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.																	.
Template SS confidence
																										138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.					.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	I	E	K	P	E	E	F	V	R	I	T	V	D	F	L	R	N
Template Known Secondary structure		.	.	.	.			S														T
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						189	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions