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Job DescriptionP23872
Confidence99.11%DateThu Jan 5 11:40:10 GMT 2012
Rank196Aligned Residues234
% Identity17%Templatec3a2nF_
PDB info PDB header:hydrolaseChain: F: PDB Molecule:haloalkane dehalogenase; PDBTitle: crystal structure of dbja (wild type type ii p21)
Resolution1.89 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.........70.........80.........90.........100.........110.........120.........130.........
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Query Sequence  TRAYMVPTKYGQVETRLFCPQPDSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPEARFPQAIEEIV
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Template Sequence  IRRAPVLG. . . . SSMAYRETGAQDAPVVLFLHGNP. . . TSSHIWRNILPLVSP. . VAHCIAPDLIGFGQSGKPDIAYRFF
Template Known Secondary structure 
TT....S
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GGGGTTTTT..TS

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Query Sequence  AACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDSVTRRLLG. . . . . . . . .
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Template Sequence  DHVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAAR. . . . . . . . RPDFVRGLAFMEFIRPMPTWQDFHHTEVAEEQDHAE
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BSSGGGTT



GGG
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   80.........90.........100.........110..... ....120.........130.........140.........150.
 
   211........220.........230.........240.
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GVWDGLTQQDLQMYEEAYLSNDADRESPYYC
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Template Conservation                                                                                  
Template Sequence  AARAVFRKFRTPGEGEAMILEANAFVERVLPGGIVRKLGDEEMAPYRTPFPTPESRRPVLAFPRELPIAGEPADVYEALQ
Template Known Secondary structure  TSTTTTT
TT
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TT

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   152.......160.........170.........180.........190.........200.........210.........220.........230.
 
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Query Sequence  LFNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTA
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Template Sequence  SAHAALAASSYPKLLFTGEPGALVS. . PEFAERFAASLTRCALIRLGAGLHYLQ. . . . . EDHADAIGRSVAGWIAG
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   232.......240.........250...... ...260.........270.........280... ......290.........300
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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