Job Description P23872 Confidence 99.92% Date Thu Jan 5 11:40:10 GMT 2012 Rank 37 Aligned Residues 245 % Identity 10% Template c2xe4A_ PDB info PDB header:hydrolase/inhibitor Chain: A: PDB Molecule:oligopeptidase b; PDBTitle: structure of oligopeptidase b from leishmania major Resolution 1.65 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.
Predicted Secondary structure																.												.	.	.	.																																																.	.	.
Query SS confidence																.												.	.	.	.																																																.	.	.
Query Sequence		E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	.	.	.
Query Conservation																.												.	.	.	.																																																.	.	.
Alig confidence																.												.	.	.	.																										.							.															.	.	.
Template Conservation																																																									.							.
Template Sequence		N	Y	K	V	E	R	R	F	A	T	A	P	D	Q	T	K	I	P	L	S	V	V	Y	H	K	D	L	D	M	S	Q	P	Q	P	C	M	L	Y	G	Y	G	S	Y	G	L	S	M	D	P	Q	F	S	I	Q	H	.	L	P	Y	C	D	R	.	G	M	I	F	A	I	A	H	I	R	G	G	S	E	L	G	R
Template Known Secondary structure		G											T	T												T	T	S		T	T	S												T	T									G	G	G	.					T	T	.	T									T	T	S		T	T		T
Template Predicted Secondary structure																																																									.							.
Template SS confidence
		457	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.		.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.
								129	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	A	R	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.
Template Conservation
Template Sequence		A	W	Y	E	I	G	A	K	Y	L	T	K	R	N	T	F	S	D	F	I	A	A	A	E	F	L	V	N	A	K	L	T	T	P	S	Q	L	A	C	E	G	R	S	A	G	G	L	L	M	G	A	V	L	N	M	R	P	D	L	F	K	V	A	L	A	G	V	P	F	V	D	V	M	T	T	M	C	D	P	S
Template Known Secondary structure						T	T	S	S	G	G	G	T																	T	T	S			G	G	G							T														G	G	G		S						S										T		T	T
Template Predicted Secondary structure
Template SS confidence
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.
		203	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.														.	.
Query SS confidence																																																					.														.	.
Query Sequence		S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	.	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q
Query Conservation																																																					.														.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.													.														.	.
Template Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	P	L	T	T	G	E	W	E	E	W	G	N	P	N	E	Y	K	Y	Y	D	Y	M	L	S	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	S	P	M	D	N	V	R	A	Q	E	Y	P	N	I	M	V	Q	C	G	L	H	D	P	R	V	A	Y	W	E	P	A	K	W	V	S	K	L	R	E	C	K
Template Known Secondary structure		S	T	T					T	T	T	T			T	T	S											.	.	.	.	.	.	.	.	.	.	.	.	.		T	G	G	G			S	S											T	T		S	S	S		T
Template Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		615	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640														.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.
		280				.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure			.	.	.
Query SS confidence			.	.	.
Query Sequence		Q	.	.	.	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation			.	.	.
Alig confidence			.	.	.															.	.	.
Template Conservation																				.	.	.
Template Sequence		T	D	N	N	E	I	L	L	N	I	D	M	E	S	G	H	F	S	.	.	.	A	K	D	R	Y	K	F	W	K	E	S	A	I	Q	Q	A	F	V	C	K	H	L
Template Known Secondary structure			S										T	T			S	S		.	.	.		S	S																			T
Template Predicted Secondary structure																				.	.	.
Template SS confidence
		682	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.				700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions