Job Description P23872 Confidence 99.52% Date Thu Jan 5 11:40:10 GMT 2012 Rank 127 Aligned Residues 183 % Identity 19% Template c2r8bA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein atu2452; PDBTitle: the crystal structure of the protein atu2452 of unknown function from2 agrobacterium tumefaciens str. c58 Resolution 2.56 Å

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		74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.												.	.	.	.	.	.	140	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	R	L	F	C	P	Q	P	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F	P	Q	.	.	.	.	.	.	.	.	.	.	.	A	I	E	E	I	V	A	A	C
Query Conservation																																																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.																.	.																				.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.																.	.
Template Sequence		F	H	K	S	R	A	G	V	A	G	A	P	L	F	V	L	L	H	G	T	G	.	.	.	G	D	E	N	Q	F	F	D	F	G	A	R	L	L	P	.	.	Q	A	T	I	L	S	P	V	G	D	V	S	E	H	G	A	A	R	F	F	R	R	T	G	E	G	V	Y	D	X	V	D	L	E	R	A	T	G	K
Template Known Secondary structure										T	T	S									T	T	.	.	.														S	T	.	.	T	S								S				T	T				S	S		B		G	G	G		B
Template Predicted Secondary structure																							.	.	.																.	.
Template SS confidence
		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70				.	.	.	.	.	.	.	.	.	80	.	.	.	.	.			.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q
Query Conservation
Alig confidence																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		X	A	D	F	I	K	A	N	R	E	H	Y	Q	A	G	P	V	I	G	L	G	F	S	N	G	A	N	I	L	A	N	V	L	I	E	.	.	.	.	.	.	Q	P	E	L	F	D	A	A	V	L	X	H	P	L	I	P	F	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure														T			S							T													.	.	.	.	.	.	S	T	T	T		S						S					S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.							160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300
Predicted Secondary structure																																														.	.
Query SS confidence																																														.	.
Query Sequence		M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M
Query Conservation																																														.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.																								.						.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.						.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	K	I	S	P	A	K	P	T	R	R	V	L	I	T	A	G	E	R	D	P	I	C	P	V	Q	L	T	K	A	L	E	E	S	L	K	A	Q	G	G	T	V	E	T	V	W	H	P	G	.	G	H	E	I	R	.	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								T	T									T	T		T	T	S																S	S								S	S	.		S	S			.	.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																		.						.	.	.	.	.
Template SS confidence
																						178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.		.	.	.	230	.
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q
Query Conservation
Alig confidence		.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	S	G	E	I	D	A	V	R	G	F	L	A	A	Y
Template Known Secondary structure		.	.	.	.												G	G	G
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						232	.	.	.	.	.	.	.	240	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions