Job Description P23872 Confidence 99.97% Date Thu Jan 5 11:40:10 GMT 2012 Rank 23 Aligned Residues 238 % Identity 10% Template c2qtbB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dipeptidyl peptidase 4; PDBTitle: human dipeptidyl peptidase iv/cd26 in complex with a 4-aryl2 cyclohexylalanine inhibitor Resolution 2.25 Å

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		58	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.		.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.
Predicted Secondary structure															.												.	.	.	.																.
Query SS confidence															.												.	.	.	.																.
Query Sequence		M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	.	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L	S	P	E	A	R	F
Query Conservation															.												.	.	.	.																.
Alig confidence															.												.	.	.	.																.
Template Conservation
Template Sequence		M	P	S	K	K	L	D	F	I	I	L	N	E	T	K	F	W	Y	Q	M	I	L	P	P	H	F	D	K	S	K	K	Y	P	L	L	L	D	V	Y	A	G	P	C	S	Q	K	A	D	T	V	F	R	L	N	W	A	T	Y	L	A	S	T	E	N	I	I	V	A	S	F	D	G	R	G	S	G	Y	Q	G	D
Template Known Secondary structure													T	T											T	T			T	T	S												T	T											S								T	T										T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		509	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.
		132									.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure			.	.	.	.	.	.	.	.
Query SS confidence			.	.	.	.	.	.	.	.
Query Sequence		P	.	.	.	.	.	.	.	.	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G	L	Y	G	L	R	D	S
Query Conservation			.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.	.	.	.																																														.	.	.	.	.	.
Template Conservation																																																								.	.	.	.	.	.
Template Sequence		K	I	M	H	A	I	N	R	R	L	G	T	F	E	V	E	D	Q	I	E	A	A	R	Q	F	S	K	M	G	F	V	D	N	K	R	I	A	I	W	G	W	S	Y	G	G	Y	V	T	S	M	V	L	G	S	.	.	.	.	.	.	G	S	G	V	F	K	C	G	I	A	V	A	P	V	S	R	W	E	Y	Y
Template Known Secondary structure					G	G	G	T	T		T	T	S															T	T	S	S												T											T	T	.	.	.	.	.	.	T		S			S						S					G	G	G	S
Template Predicted Secondary structure																																																								.	.	.	.	.	.
Template SS confidence
		589	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.							.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.
		204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.		.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280
Predicted Secondary structure																																																		.																.	.
Query SS confidence																																																		.																.	.
Query Sequence		V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	.	P	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S	R	L	L	Y	Q	T	L	A	A	H	Q	Q
Query Conservation																																																		.																.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																																			.																.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	V	Y	T	E	R	Y	M	G	L	P	T	P	E	D	N	L	D	H	Y	R	N	S	T	V	M	S	R	A	E	N	F	K	Q	V	E	Y	L	L	I	H	G	T	A	D	D	N	V	H	F	Q	Q	S	A	Q	I	S	K	A	L	V	D	V	G	V
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	B											S	S	T	T	T	T							S		S	G	G	G	G	G	G	G	G	G	S								T	T		S	S	S		T													T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																663	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.
		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation
Alig confidence																	.	.	.	.
Template Conservation																	.	.	.	.
Template Sequence		D	F	Q	A	M	W	Y	T	D	E	D	H	G	I	A	.	.	.	.	S	S	T	A	H	Q	H	I	Y	T	H	M	S	H	F	I	K	Q	C	F
Template Known Secondary structure									T	T			T	T			.	.	.	.	S																			T
Template Predicted Secondary structure																	.	.	.	.
Template SS confidence
		729	730	.	.	.	.	.	.	.	.	.	740	.	.	.					.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions