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Job DescriptionP23872
Confidence99.86%DateThu Jan 5 11:40:10 GMT 2012
Rank54Aligned Residues257
% Identity17%Templatec2hdwB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hypothetical protein pa2218; PDBTitle: crystal structure of hypothetical protein pa2218 from pseudomonas2 aeruginosa
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   53......60.........70 .........80. ........90.........100.........110.........120........
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Query Sequence  AGAPEMATRAYMVPTKYG. QVETRLFCPQP. . . DSPATLFYLHGGGFILGNLDTHDRIMRLLASYSQCTVIGIDYTLSPE
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Template Sequence  PLSAKVEHRKVTFANRYGITLAADLYLPKNRGGDRLPAIVIGGPFG. . . AVKEQSSGLYAQTMAERGFVTLAFDPSYTGE
Template Known Secondary structure 


TT
TTS
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   61........70.........80.........90.........100...... ...110.........120.........130.......
 
   129130.........140.........150.........160.........170.........180.........190.........200...
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Query Sequence  . . . . . ARFPQAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGLRDS
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Template Sequence  SGGQPRNVASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDKRVKAVVTSTMYDMTRVMSKGYNDS
Template Known Secondary structure  S

SSSS


TTSTTT
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TGGG
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   138.140.........150.........160.........170.........180.........190.........200.........210.......
 
   204.....210.........220.........230... ......240..
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Query Sequence  VTRRLLGGVWDGLTQQDLQMYEEAYLSNDA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . DRESPYYCL
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Template Conservation                                                                                  
Template Sequence  VTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNMPI
Template Known Secondary structure 

SS

B
S
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SS

TSTTT

TT
TTTT


BTTTTTS
S
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   218.220.........230.........240.........250.........260.........270.........280.........290.......
 
   243......250.........260.........270.........280.........290.........300.........310.........
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Query Sequence  FNNDLTREVPPCFIAGAEFDPLLDDSRLLYQTLAAHQQPCEFKLYPGTLHAFLHYSRMMKTADEALRDGAQFFTAQL
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Template Sequence  LTYIKEISPRPILLIHGERAHSRYFSE. . . TAYAAAAEPKELLIVPGASHVDLYDRLD. . . . RIPFDRIAGFFDEHL
Template Known Secondary structure 
TTGGGSTTS
TT
TT...S
SSTT

ST
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   298.300.........310.........320.... .....330.........340.........350.. .......360.......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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