Job Description P23872 Confidence 99.97% Date Thu Jan 5 11:40:10 GMT 2012 Rank 19 Aligned Residues 239 % Identity 14% Template c2eepA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl aminopeptidase iv, putative; PDBTitle: prolyl tripeptidyl aminopeptidase complexed with an inhibitor Resolution 2.20 Å

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		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.			.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																				.	.												.	.	.	.																					.	.
Query SS confidence																				.	.												.	.	.	.																					.	.
Query Sequence		A	G	A	P	E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	.	.	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T
Query Conservation																				.	.												.	.	.	.																					.	.
Alig confidence																				.	.												.	.	.	.																					.	.													.
Template Conservation																																																																							.
Template Sequence		A	K	N	A	M	P	E	I	R	T	G	T	I	M	A	A	D	G	Q	T	P	L	Y	Y	K	L	T	M	P	L	H	F	D	P	A	K	K	Y	P	V	I	V	Y	V	Y	G	G	P	H	A	Q	L	V	T	K	T	W	R	V	G	G	W	D	I	Y	M	A	Q	K	.	G	Y	A	V	F	T	V	D	S	R
Template Known Secondary structure																	T	T	S	S	S										T	T			T	T	S												T	T						S	S				T	T								T	.	T									T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		469	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.		.	.	540	.	.	.	.	.	.	.
		125	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.
Query Sequence		L	S	P	E	.	.	.	.	.	.	.	.	A	R	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G
Query Conservation						.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.																																																		.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		G	S	A	N	R	G	A	A	F	E	Q	V	I	H	R	R	L	G	Q	T	E	M	A	D	Q	M	C	G	V	D	F	L	K	S	Q	S	W	V	D	A	D	R	I	G	V	H	G	W	S	Y	G	G	F	M	T	T	N	L	M	L	T	.	.	.	.	.	.	H	G	D	V	F	K	V	G	V	A	G	G	P
Template Known Secondary structure		T		S	S	S							T	T	T	T		T	T																T	S	T	T												T													.	.	.	.	.	.	S	T	T	T								S
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		555	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.							.	.	.	.	620	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	.	.	P	L	L	D	D	S	R	L	L	Y	Q	T
Query Conservation																																																																				.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	I	D	W	N	R	Y	E	I	M	Y	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	F	D	A	P	Q	E	N	P	E	G	Y	D	A	A	N	L	L	K	R	A	G	D	L	K	G	R	L	M	L	I	H	G	A	I	D	P	V	V	V	W	Q	H	S	L	L	F	L	D	A
Template Known Secondary structure					G	G	G	S	B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	T	T										G	G	G	G	G	G	G			S								T	T		S	S	S		T
Template Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		629	630	.	.	.	.	.	.	.	.	.	640	.																	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.
		275	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation
Alig confidence																								.	.	.	.	.
Template Conservation																								.	.	.	.	.
Template Sequence		C	V	K	A	R	T	Y	P	D	Y	Y	V	Y	P	S	H	E	H	N	V	M	G	.	.	.	.	.	P	D	R	V	H	L	Y	E	T	I	T	R	Y	F	T	D	H	L
Template Known Secondary structure						T									T	T			S	S			T	.	.	.	.	.	T
Template Predicted Secondary structure																								.	.	.	.	.
Template SS confidence
		693	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.						.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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