Job Description P23872 Confidence 100.00% Date Thu Jan 5 11:40:10 GMT 2012 Rank 16 Aligned Residues 232 % Identity 18% Template c2ecfA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:dipeptidyl peptidase iv; PDBTitle: crystal structure of dipeptidyl aminopeptidase iv from2 stenotrophomonas maltophilia Resolution 2.80 Å

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		57	.	.	60	.	.	.	.	.	.	.	.	.	70			.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100						.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure																.	.												.	.	.	.																				.	.	.	.	.
Query SS confidence																.	.												.	.	.	.																				.	.	.	.	.
Query Sequence		E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	.	.	.	.	.	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T	L
Query Conservation																.	.												.	.	.	.																				.	.	.	.	.
Alig confidence																.	.												.	.	.	.																				.	.	.	.	.														.
Template Conservation																																																																						.
Template Sequence		Q	R	P	V	E	F	G	T	L	T	A	A	D	G	K	T	P	L	N	Y	S	V	I	K	P	A	G	F	D	P	A	K	R	Y	P	V	A	V	Y	V	Y	G	G	P	A	S	Q	T	V	T	D	S	W	P	G	R	G	D	H	L	F	N	Q	Y	L	A	Q	Q	.	G	Y	V	V	F	S	L	D	N	R	G
Template Known Secondary structure													T	T	S	S											S	S			T	T	S											S	T	T			S		S	S					S												T	.	T									T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		484	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.		.	.	.	.	.	.	.	.	560	.	.
		126	.	.	.	130	.												.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	P	E	A	R	F	.	.	.	.	.	.	.	.	.	.	.	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W
Query Conservation								.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.																		.	.	.																											.	.	.	.	.	.
Template Conservation																																				.	.	.																											.	.	.	.	.	.
Template Sequence		T	P	R	R	G	R	D	F	G	G	A	L	Y	G	K	Q	G	T	V	E	V	A	D	Q	L	R	G	V	A	W	L	K	Q	Q	.	.	.	P	W	V	D	P	A	R	I	G	V	Q	G	W	S	N	G	G	Y	M	T	L	M	L	L	A	K	.	.	.	.	.	.	A	S	D	S	Y	A	C	G	V	A	G
Template Known Secondary structure			S	S	S							T	T	T	T		T	T	T															T	S	.	.	.	T	T												T													.	.	.	.	.	.		T	T	T		S
Template Predicted Secondary structure																																				.	.	.																											.	.	.	.	.	.
Template SS confidence
		563	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.				.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.							.	.	.	.	.	.	.	630	.	.	.
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.			.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																																																																						.	.
Query SS confidence																																																																						.	.
Query Sequence		Y	G	L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	P	C	F	I	A	G	A	E	F	D	.	.	P	L	L	D	D	S	R	L	L	Y
Query Conservation																																																																						.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	P	V	T	D	W	G	L	Y	D	S	H	Y	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	Y	M	D	L	P	A	R	N	D	A	G	Y	R	E	A	R	V	L	T	H	I	E	G	L	R	S	P	L	L	L	I	H	G	M	A	D	D	N	V	L	F	T	N	S	T	S	L	M
Template Known Secondary structure		S					G	G	G	S	B						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						T	G	G	G									S	G	G	G	G	G	G			S								T	T		S	S	S		T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		634	.	.	.	.	.	640	.	.	.	.	.	.	.	.																	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.
		273	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	L	A	A	H	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation
Alig confidence																										.	.	.	.	.
Template Conservation																										.	.	.	.	.
Template Sequence		S	A	L	Q	K	R	G	Q	P	F	E	L	M	T	Y	P	G	A	K	H	G	L	S	G	.	.	.	.	.	A	D	A	L	H	R	Y	R	V	A	E	A	F	L	G	R	C	L
Template Known Secondary structure							T	T									T	T			S	S				.	.	.	.	.
Template Predicted Secondary structure																										.	.	.	.	.
Template SS confidence
		698	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.						.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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