Job Description P23872 Confidence 99.95% Date Thu Jan 5 11:40:10 GMT 2012 Rank 28 Aligned Residues 249 % Identity 14% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

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		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70		.	.	.	.	.	.	.	.	.	80	.					.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure																							.												.	.	.	.
Query SS confidence																							.												.	.	.	.
Query Sequence		F	W	N	A	G	A	P	E	M	A	T	R	A	Y	M	V	P	T	K	Y	G	.	Q	V	E	T	R	L	F	C	P	Q	P	.	.	.	.	D	S	P	A	T	L	F	Y	L	H	G	G	G	F	I	L	G	N	L	D	T	H	D	R	I	M	R	L	L	A	S	Y	S	Q	C	T	V	I	G	I	D	Y	T
Query Conservation																							.												.	.	.	.
Alig confidence																							.												.	.	.	.																																	.
Template Conservation																																																																							.
Template Sequence		V	K	G	I	D	A	S	D	Y	Q	T	V	Q	I	F	Y	P	S	K	D	G	T	K	I	P	M	F	I	V	H	K	K	G	I	K	L	D	G	S	H	P	A	F	L	Y	G	Y	G	G	F	N	I	S	I	T	P	N	Y	S	V	S	R	L	I	F	V	R	H	M	.	G	G	V	L	A	V	A	N	I	R
Template Known Secondary structure			T	T			G	G	G											T	T	S											T	T				S	S		S										T	T																			.										T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		427	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.		.	.	.	.	500	.	.	.	.	.
		125	.	.	.	.	130									.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.
Query Sequence		L	S	P	E	A	R	.	.	.	.	.	.	.	.	F	P	Q	A	I	E	E	I	V	A	A	C	C	Y	F	H	Q	Q	A	E	D	Y	Q	I	N	M	S	R	I	G	F	A	G	D	S	A	G	A	M	L	A	L	A	S	A	L	W	L	R	D	K	Q	I	D	C	G	K	V	A	G	V	L	L	W	Y	G
Query Conservation								.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.																																																.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.
Template Sequence		G	G	G	E	Y	G	E	T	W	H	K	G	G	I	L	A	N	K	Q	N	C	F	D	D	F	Q	C	A	A	E	Y	L	I	K	E	G	Y	T	S	P	K	R	L	T	I	N	G	G	S	N	G	G	L	L	V	A	T	C	A	N	Q	.	.	.	.	.	.	R	P	D	L	F	G	C	V	I	A	Q	V	G
Template Known Secondary structure		T	S	S	T	T							T	T	S	G	G	G	T																	T	T	S			G	G	G							T													.	.	.	.	.	.		G	G	G		S						S
Template Predicted Secondary structure																																																															.	.	.	.	.	.
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.							.	.	.	570	.	.	.	.	.	.	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.							.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.
Predicted Secondary structure																																																										.	.	.	.	.	.															.	.
Query SS confidence																																																										.	.	.	.	.	.															.	.
Query Sequence		L	Y	G	L	R	D	S	V	T	R	R	L	L	G	G	V	W	D	G	L	T	Q	Q	D	L	Q	M	Y	E	E	A	Y	L	S	N	D	A	D	R	E	S	P	Y	Y	C	L	F	N	N	D	L	T	R	E	V	P	.	.	.	.	.	.	P	C	F	I	A	G	A	E	F	D	P	L	L	D	.	.	D	S
Query Conservation																																																										.	.	.	.	.	.															.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.															.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	M	D	M	L	K	F	H	K	Y	T	I	G	H	A	.	.	.	.	.	.	.	.	.	.	.	W	T	T	D	Y	G	S	D	S	K	Q	H	F	E	W	L	I	K	Y	S	P	L	H	N	V	K	L	P	E	A	D	D	I	Q	Y	P	S	M	L	L	L	T	A	D	H	D	D	R	V	V	P	L	H	S
Template Known Secondary structure					T	T	T	G	G	G	S	T	T	G	G	G	.	.	.	.	.	.	.	.	.	.	.	G								S												G	G	G						S	S	T	T												T	T			S	S		T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		580	.	.	.	.	.	.	.	.	.	590	.	.	.	.												.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.
		269	270	.	.	.	.	.	.	.	.								.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.	.
Query Sequence		R	L	L	Y	Q	T	L	A	A	H	.	.	.	.	.	.	.	Q	Q	P	C	E	F	K	L	Y	P	G	T	L	H	A	F	L	H	Y	S	R	M	M	K	T	A	D	E	A	L	R	D	G	A	Q	F	F	T	A	Q	L
Query Conservation												.	.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.	.																	.	.	.
Template Conservation																																			.	.	.
Template Sequence		L	K	F	I	A	T	L	Q	Y	I	V	G	R	S	R	K	Q	N	N	P	L	L	I	H	V	D	T	K	A	G	H	G	A	.	.	.	G	K	P	T	A	K	V	I	E	E	V	S	D	M	F	A	F	I	A	R	C	L
Template Known Secondary structure												T	T	T	S	T	T			S								S	S			S	S	T	.	.	.	T
Template Predicted Secondary structure																																			.	.	.
Template SS confidence
		650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.				.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions