Return to main results Retrieve Phyre Job Id

Job DescriptionP23872
Confidence99.56%DateThu Jan 5 11:40:10 GMT 2012
Rank118Aligned Residues262
% Identity10%Templatec1mpxB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:alpha-amino acid ester hydrolase; PDBTitle: alpha-amino acid ester hydrolase labeled with selenomethionine
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   48.50.........60.........70 .........80.... .....90.... .....100.........110.......
Predicted Secondary structure 













.






.




........









Query SS confidence 






















.













.









. . . . . . . .






















Query Sequence  RRFWNAGAPEMATRAYMVPTKYG. QVETRLFCPQPDSP. ATLFYLHGGG. . . . . . . . FILGNLDTHDRIMRLLASYSQCT
Query Conservation                         . 
   
  
     .
 

  



........   
            
   
  
Alig confidence 






















.













.









........


















.


Template Conservation             
   
 
  


  
 
 
  
      
 

   


                        
  .


Template Sequence  PFVAADASNDYIKREVXIPXRDGVKLHTVIVLPKGAKNAPIVLTRTPYDASGRTERLASPHXKDLLSAGDDVFVEG. GYI
Template Known Secondary structure 





TT
S
TTS
TT

SSS
T
SS

S
S
GGGT.T
Template Predicted Secondary structure 













































.

Template SS confidence 















































































   35....40.........50.........60.........70.........80.........90.........100.........110 ...
 
   118.120.........130.. .......140.........150.........160.........170.........180.
Predicted Secondary structure 










................

















Query SS confidence 














. . . . . . . . . . . . . . . .
















































Query Sequence  VIGIDYTLSPEARFP. . . . . . . . . . . . . . . . QAIEEIVAACCYFHQQAEDYQINMSRIGFAGDSAGAMLALASALWLRDK
Query Conservation 
  



  
     ................    
   
                                        
Alig confidence 














................















...

























....
Template Conservation 

  
 

 
 
 
                  
  
  
 
 
   
...  

 




 
 



      
  ....
Template Sequence  RVFQDVRGKYGSEGDYVXTRPLRGPLNPSEVDHATDAWDTIDWLVKN. . . VSESNGKVGXIGSSYEGFTVVXALTN. . . .
Template Known Secondary structure 
TTSTT

S


TT


SBTTB
SS

...
TTTTS....
Template Predicted Secondary structure 

























...











....
Template SS confidence 















































































   114.....120.........130.........140.........150.........160 .........170.........180......
 
   182.......190.........200.........210.........220.........230.........240
Predicted Secondary structure 




































.....................
Query SS confidence 


























































. . . . . . . . . . . . . . . . . . . . .
Query Sequence  QIDCGKVAGVLLWYGLYGLRDSVTRRLLGGVWDGLTQQDLQMYEEAYLSNDADRESPYY. . . . . . . . . . . . . . . . . . . . .
Query Conservation                                                             .....................
Alig confidence  ..
























































.....................
Template Conservation  ..  
 





     
 
       

                                                   
Template Sequence  . . PHPALKVAVPESPXIDGWXGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQ
Template Known Secondary structure  ..

TTS



TTTTSSSTTBGGGSSSS






SSS

STTGGG
Template Predicted Secondary structure  ..













































Template SS confidence 















































































   187..190.........200.........210.........220.........230.........240.........250.........260....
 
   241........250.........260...... ...270.........280.........290.....
Predicted Secondary structure  .....................

















....









Query SS confidence  . . . . . . . . . . . . . . . . . . . . .

























. . . .




























Query Sequence  . . . . . . . . . . . . . . . . . . . . . CLFNNDLTREVPPCFIAGAEFDPLLD. . . . DSRLLYQTLAAHQQPCEFKLYPGTLHAFL
Query Conservation  .....................           

 

  
  
    ....        
   
    
    
  
 
 
Alig confidence  .....................

























....




























Template Conservation               
  
             
 

 
 
 

 
                         

 


 
    
Template Sequence  LPWWHKLTEHAAYDAFWQEQALDKVXARTPLKVPTXWLQGLWDQEDXWGAIHSYAAXEPRDKRNTLNYLVXGPWRHSQVN
Template Known Secondary structure  ST
SS
TT
TS


S
TT
SS
SSGGG
TTSSSS
STTGGG
Template Predicted Secondary structure 




















































Template SS confidence 















































































   265....270.........280.........290.........300.........310.........320.........330.........340....
 
   296. ..300.........310.........
Predicted Secondary structure 

........




Query SS confidence 

. . . . . . . .





















Query Sequence  HY. . . . . . . . SRMMKTADEALRDGAQFFTAQL
Query Conservation    ........      
         

   
Alig confidence 

........





















Template Conservation                            


  
Template Sequence  YDGSALGALNFEGDTARQFRHDVLRPFFDQYL
Template Known Secondary structure  S

STT
SS
T
Template Predicted Secondary structure 

















Template SS confidence 































   345....350.........360.........370......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions