Job Description P31463 Confidence 38.60% Date Thu Jan 5 11:47:52 GMT 2012 Rank 389 Aligned Residues 199 % Identity 14% Template d2czla1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.55

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		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	F	E	L	A	A	E	S	P	L	M	M	I	M	L	N	A	L	S	K	Q	I	Y	Q	R	Y	P	Q	A	T	I	K	L	R	N	W	D	Y	D	S	L	D	A	I	T	R	G	E	V	D	I	G	F	S	G	R	E	S	H	P	R	S	R	E	L	L	S	S	L	P	L	A	I	D	Y	E	V	L	F	S
Query Conservation
Alig confidence																																	.																																							.	.	.
Template Conservation																																	.																																							.	.	.
Template Sequence		A	L	R	L	G	F	S	P	P	N	D	T	F	I	F	Y	A	L	V	H	G	R	V	E	S	P	V	P	L	E	P	.	V	L	E	D	V	E	T	L	N	R	W	A	L	E	G	R	L	P	L	T	K	L	S	Y	A	A	Y	A	Q	V	R	D	R	Y	V	A	L	R	.	.	.	S	G	G	A	L	G	R
Template Known Secondary structure																					T	T	S	S			S	S					.														T	T			S										T	T		T	T	T					S	.	.	.	S	S					S
Template Predicted Secondary structure																																	.																																							.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.				.	.	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	V	P	C	V	W	L	R	K	D	H	P	A	L	H	Q	T	W	N	L	D	T	F	L	R	Y	P	H	I	S	I	C	W	E	Q	S	D	T	W	A	L	D	N	V	L	Q	E	L	G	R	E	R	T	I	A	M	S	L	P	E	F	E	Q	S	L	F	M	A	A	Q	P	D	N	L	L	L	A	T	A	P
Query Conservation
Alig confidence											.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template Sequence		G	V	G	P	L	V	V	A	R	.	.	.	.	.	.	.	.	G	P	L	Q	A	L	E	G	L	R	V	A	V	P	G	R	H	T	T	A	Y	F	L	L	S	L	Y	A	Q	.	.	.	.	.	.	G	F	V	P	V	E	V	R	Y	D	R	I	L	P	M	V	A	Q	G	E	V	E	A	G	L	I	I	H
Template Known Secondary structure		S								S	.	.	.	.	.	.	.	.	S			S			T	T						S		T	T	S											S	.	.	.	.	.	.	S								G	G	G							T	T	S	S	S						T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.																														.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.									.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		258	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	C	Q	Y	Y	N	Q	L	H	Q	L	P	L	V	A	L	P	L	P	F	D	E	S	Q	Q	K	K	L	E	V	P	F	T	L	L	W	H	K	R	N	S	H	N	P	K	I	V	W	L	R	E	T	I	K	N	L	Y	A
Query Conservation
Alig confidence																																						.	.
Template Conservation																																						.	.
Template Sequence		E	S	R	F	T	Y	P	R	Y	G	L	V	Q	V	V	D	L	G	A	W	W	E	E	R	T	G	L	P	L	P	L	G	A	I	L	A	.	.	R	R	D	L	G	E	G	L	I	R	A	L	D	E	A	V	R	R	S	V	A
Template Known Secondary structure		T					G	G	G	G	T																S	S										.	.		G	G	G
Template Predicted Secondary structure																																						.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.			.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions